Entry - *300470 - MELANOMA ANTIGEN, FAMILY D, 2; MAGED2 - OMIM

 
* 300470

MELANOMA ANTIGEN, FAMILY D, 2; MAGED2


Alternative titles; symbols

MAGED


HGNC Approved Gene Symbol: MAGED2

Cytogenetic location: Xp11.21   Genomic coordinates (GRCh38) : X:54,807,745-54,816,015 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xp11.21 Bartter syndrome, type 5, antenatal, transient 300971 XLR 3

TEXT

Cloning and Expression

By database searching with the sequence of MAGEA10 (300343) as query, Lucas et al. (1999) identified a distantly related but homologous gene, MAGED2, which they designated MAGED. The deduced 606-amino acid protein contains a segment in its central region that is homologous to the 200-amino acid MAGE segment at the C terminus of other MAGE proteins. RT-PCR analysis demonstrated that, unlike the testis- and tumor-specific expression of many MAGE genes, MAGED2 is expressed ubiquitously in normal human tissues and in most, if not all, cell types. Sequence analysis of MAGED2 and necdin (602117) did not reveal any of the known MAGE antigenic peptides.

Langnaese et al. (2001) also cloned human MAGED2 as well as the rat and mouse orthologs. The human protein contains several putative nuclear localization signals and potential phosphorylation sites for protein kinases. It shares 86% and 43% overall sequence identity with the rat ortholog and human MAGED1 (300224), respectively. Northern blot analysis detected a 2.2-kb transcript in human brain, skeletal muscle, heart, placenta, and pancreas, and in lower amounts in kidney and lung. Expression was detectable in several human brain regions. In situ hybridization in rat brain showed marked expression in hippocampus, cerebellum, choroid plexus, and in various nuclei of the hypothalamus and brainstem. In rat testis, MAGED2 was detected only in the interstitium, most probably in the Leydig cells, whereas no expression was detected in the tubuli.


Gene Structure

Lucas et al. (1999) determined that the MAGED2 gene contains 14 exons, of which 2 are alternative first exons. The ORF begins in exon 2 and ends in exon 12. Langnaese et al. (2001) stated that the gene spans approximately 8.3 kb.


Mapping

By genomic sequence analysis, Lucas et al. (1999) identified the MAGED2 gene in a PAC clone mapped by FISH to Xp11. Langnaese et al. (2001) identified the MAGED2 gene with the Xp11.2 hotspot for X-linked mental retardation (XLMR).

See 300016 for a discussion of the high frequency of genes on the X chromosome encoding proteins with the MAGE domain as well as other cancer-testis antigen genes (Ross et al., 2005).


Molecular Genetics

Langnaese et al. (2001) identified 5 SNPs encoding synonymous amino acids in the protein sequence of MAGED2 in patients with XLMR.

In 9 families with transient antenatal Bartter syndrome (BARTS5; 300971), in which mothers of affected male fetuses develop early-onset severe polyhydramnios, Laghmani et al. (2016) identified mutations in the MAGED2 gene (see, e.g., 300470.0001-300470.0004). The fetal genotype was demonstrated to be both necessary and sufficient for the full obstetric and perinatal phenotype by a de novo mutation (K133X; 300470.0005) detected in the affected male infant in 1 family.


ALLELIC VARIANTS ( 5 Selected Examples):

.0001 BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, TYR346TER
  
RCV000211517

In a family with transient antenatal Bartter syndrome type 5 (BARTS5; 300971), Laghmani et al. (2016) identified a c.1038C-G transversion in exon 7 of the MAGED2 gene, resulting in a tyr346-to-ter (Y346X) substitution. The mutation cosegregated with the 3 affected males and both carrier mothers, and was not found in 110 controls or in the 1000 Genomes or ExAC databases.


.0002 BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, IVS6, A-G, -2
  
RCV000211544

In a German family with transient antenatal Bartter syndrome type 5 (BARTS5; 300971), originally reported by Engels et al. (1991), Laghmani et al. (2016) identified a splice site transition (c.991-2A-G) in intron 6 of the MAGED2 gene. The mutation, which was not found in 110 controls or in the 1000 Genomes or ExAC databases, was present in the carrier mother and all 3 affected sons, the eldest of whom had polyhydramnios only and did not exhibit polyuria postnatally.


.0003 BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, 2-BP DEL, 386TG
  
RCV000211479

In a Flemish family with transient antenatal Bartter syndrome type 5 (BARTS5; 300971), originally reported by Reinalter et al. (1998), Laghmani et al. (2016) identified a 2-bp deletion (c.386delTG) in exon 3 of the MAGED2 gene, causing a frameshift predicted to result in a premature termination codon (Val129GlyfsTer2). The mutation was present in the mother and her affected son, but was not found in 110 controls or in the 1000 Genomes or ExAC databases. An earlier pregnancy had also been complicated by polyhydramnios, with premature delivery at 25 weeks' gestation of a male infant who died at 7 hours of life.


.0004 BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, ARG446CYS
  
RCV000211522...

In a woman with early-onset severe polyhydramnios and her male fetus who died at 22 weeks' gestation (BARTS5; 300971), Laghmani et al. (2016) identified a c.1336C-T transition in exon 11 of the MAGED2 gene, resulting in an arg446-to-cys (R446C) substitution. The mutation was not found in 110 controls or in the 1000 Genomes or ExAC databases.


.0005 BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, LYS133TER
  
RCV000211438

In a male infant with transient antenatal Bartter syndrome-5 (BARTS5; 300971), Laghmani et al. (2016) identified a de novo c.397A-T transversion in exon 3 of the MAGED2 gene, resulting in a lys133-to-ter (K133X) substitution. The mutation was not found in 110 controls or in the 1000 Genomes or ExAC databases; it also was not detected in the proband's mother, who experienced early-onset severe polyhydramnios, thus demonstrating that the fetal genotype is sufficient for the full obstetric and perinatal phenotype.


REFERENCES

  1. Engels, A., Gordjani, N., Nolte, S., Seyberth, H. W. Angeborene passagere hyperprostaglandinurische Tubulopathie bei zwei fruhgeborenen Geschwistern. Mschr. Kinderheilk. 139: 185 only, 1991.

  2. Laghmani, K., Beck, B. B., Yang, S.-S., Seaayfan, E., Wenzel, A., Reusch, B., Vitzthum, H., Priem, D., Demaretz, S., Bergmann, K., Duin, L. K., Gobel, H., and 21 others. Polyhydramnios, transient antenatal Bartter's syndrome, and MAGED2 mutations. New Eng. J. Med. 374: 1853-1863, 2016. [PubMed: 27120771, related citations] [Full Text]

  3. Langnaese, K., Kloos, D. U., Wehnert, M., Seidel, B., Wieacker, P. Expression pattern and further characterization of human MAGED2 and identification of rodent orthologues. Cytogenet. Cell Genet. 94: 233-240, 2001. [PubMed: 11856887, related citations] [Full Text]

  4. Lucas, S., Brasseur, F., Boon, T. A new MAGE gene with ubiquitous expression does not code for known MAGE antigens recognized by T cells. Cancer Res. 59: 4100-4103, 1999. [PubMed: 10463614, related citations]

  5. Reinalter, S., Devlieger, H., Proesmans, W. Neonatal Bartter syndrome: spontaneous resolution of all signs and symptoms. Pediat. Nephrol. 12: 186-188, 1998. [PubMed: 9630034, related citations] [Full Text]

  6. Ross, M. T., Grafham, D. V., Coffey, A. J., Scherer, S., McLay, K., Muzny, D., Platzer, M., Howell, G. R., Burrows, C., Bird, C. P., Frankish, A., Lovell, F. L., and 270 others. The DNA sequence of the human X chromosome. Nature 434: 325-337, 2005. [PubMed: 15772651, images, related citations] [Full Text]


Marla J. F. O'Neill - updated : 05/17/2016
Victor A. McKusick - updated : 3/21/2005
Creation Date:
Carol A. Bocchini : 12/26/2003
alopez : 09/23/2016
alopez : 05/17/2016
alopez : 3/24/2005
terry : 3/21/2005
terry : 3/3/2005
tkritzer : 12/29/2003
carol : 12/26/2003

* 300470

MELANOMA ANTIGEN, FAMILY D, 2; MAGED2


Alternative titles; symbols

MAGED


HGNC Approved Gene Symbol: MAGED2

Cytogenetic location: Xp11.21   Genomic coordinates (GRCh38) : X:54,807,745-54,816,015 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xp11.21 Bartter syndrome, type 5, antenatal, transient 300971 X-linked recessive 3

TEXT

Cloning and Expression

By database searching with the sequence of MAGEA10 (300343) as query, Lucas et al. (1999) identified a distantly related but homologous gene, MAGED2, which they designated MAGED. The deduced 606-amino acid protein contains a segment in its central region that is homologous to the 200-amino acid MAGE segment at the C terminus of other MAGE proteins. RT-PCR analysis demonstrated that, unlike the testis- and tumor-specific expression of many MAGE genes, MAGED2 is expressed ubiquitously in normal human tissues and in most, if not all, cell types. Sequence analysis of MAGED2 and necdin (602117) did not reveal any of the known MAGE antigenic peptides.

Langnaese et al. (2001) also cloned human MAGED2 as well as the rat and mouse orthologs. The human protein contains several putative nuclear localization signals and potential phosphorylation sites for protein kinases. It shares 86% and 43% overall sequence identity with the rat ortholog and human MAGED1 (300224), respectively. Northern blot analysis detected a 2.2-kb transcript in human brain, skeletal muscle, heart, placenta, and pancreas, and in lower amounts in kidney and lung. Expression was detectable in several human brain regions. In situ hybridization in rat brain showed marked expression in hippocampus, cerebellum, choroid plexus, and in various nuclei of the hypothalamus and brainstem. In rat testis, MAGED2 was detected only in the interstitium, most probably in the Leydig cells, whereas no expression was detected in the tubuli.


Gene Structure

Lucas et al. (1999) determined that the MAGED2 gene contains 14 exons, of which 2 are alternative first exons. The ORF begins in exon 2 and ends in exon 12. Langnaese et al. (2001) stated that the gene spans approximately 8.3 kb.


Mapping

By genomic sequence analysis, Lucas et al. (1999) identified the MAGED2 gene in a PAC clone mapped by FISH to Xp11. Langnaese et al. (2001) identified the MAGED2 gene with the Xp11.2 hotspot for X-linked mental retardation (XLMR).

See 300016 for a discussion of the high frequency of genes on the X chromosome encoding proteins with the MAGE domain as well as other cancer-testis antigen genes (Ross et al., 2005).


Molecular Genetics

Langnaese et al. (2001) identified 5 SNPs encoding synonymous amino acids in the protein sequence of MAGED2 in patients with XLMR.

In 9 families with transient antenatal Bartter syndrome (BARTS5; 300971), in which mothers of affected male fetuses develop early-onset severe polyhydramnios, Laghmani et al. (2016) identified mutations in the MAGED2 gene (see, e.g., 300470.0001-300470.0004). The fetal genotype was demonstrated to be both necessary and sufficient for the full obstetric and perinatal phenotype by a de novo mutation (K133X; 300470.0005) detected in the affected male infant in 1 family.


ALLELIC VARIANTS 5 Selected Examples):

.0001   BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, TYR346TER
SNP: rs878854404, ClinVar: RCV000211517

In a family with transient antenatal Bartter syndrome type 5 (BARTS5; 300971), Laghmani et al. (2016) identified a c.1038C-G transversion in exon 7 of the MAGED2 gene, resulting in a tyr346-to-ter (Y346X) substitution. The mutation cosegregated with the 3 affected males and both carrier mothers, and was not found in 110 controls or in the 1000 Genomes or ExAC databases.


.0002   BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, IVS6, A-G, -2
SNP: rs878854405, ClinVar: RCV000211544

In a German family with transient antenatal Bartter syndrome type 5 (BARTS5; 300971), originally reported by Engels et al. (1991), Laghmani et al. (2016) identified a splice site transition (c.991-2A-G) in intron 6 of the MAGED2 gene. The mutation, which was not found in 110 controls or in the 1000 Genomes or ExAC databases, was present in the carrier mother and all 3 affected sons, the eldest of whom had polyhydramnios only and did not exhibit polyuria postnatally.


.0003   BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, 2-BP DEL, 386TG
SNP: rs878854406, ClinVar: RCV000211479

In a Flemish family with transient antenatal Bartter syndrome type 5 (BARTS5; 300971), originally reported by Reinalter et al. (1998), Laghmani et al. (2016) identified a 2-bp deletion (c.386delTG) in exon 3 of the MAGED2 gene, causing a frameshift predicted to result in a premature termination codon (Val129GlyfsTer2). The mutation was present in the mother and her affected son, but was not found in 110 controls or in the 1000 Genomes or ExAC databases. An earlier pregnancy had also been complicated by polyhydramnios, with premature delivery at 25 weeks' gestation of a male infant who died at 7 hours of life.


.0004   BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, ARG446CYS
SNP: rs878854407, ClinVar: RCV000211522, RCV003227716

In a woman with early-onset severe polyhydramnios and her male fetus who died at 22 weeks' gestation (BARTS5; 300971), Laghmani et al. (2016) identified a c.1336C-T transition in exon 11 of the MAGED2 gene, resulting in an arg446-to-cys (R446C) substitution. The mutation was not found in 110 controls or in the 1000 Genomes or ExAC databases.


.0005   BARTTER SYNDROME, TYPE 5, ANTENATAL, TRANSIENT

MAGED2, LYS133TER
SNP: rs875989852, gnomAD: rs875989852, ClinVar: RCV000211438

In a male infant with transient antenatal Bartter syndrome-5 (BARTS5; 300971), Laghmani et al. (2016) identified a de novo c.397A-T transversion in exon 3 of the MAGED2 gene, resulting in a lys133-to-ter (K133X) substitution. The mutation was not found in 110 controls or in the 1000 Genomes or ExAC databases; it also was not detected in the proband's mother, who experienced early-onset severe polyhydramnios, thus demonstrating that the fetal genotype is sufficient for the full obstetric and perinatal phenotype.


REFERENCES

  1. Engels, A., Gordjani, N., Nolte, S., Seyberth, H. W. Angeborene passagere hyperprostaglandinurische Tubulopathie bei zwei fruhgeborenen Geschwistern. Mschr. Kinderheilk. 139: 185 only, 1991.

  2. Laghmani, K., Beck, B. B., Yang, S.-S., Seaayfan, E., Wenzel, A., Reusch, B., Vitzthum, H., Priem, D., Demaretz, S., Bergmann, K., Duin, L. K., Gobel, H., and 21 others. Polyhydramnios, transient antenatal Bartter's syndrome, and MAGED2 mutations. New Eng. J. Med. 374: 1853-1863, 2016. [PubMed: 27120771] [Full Text: https://doi.org/10.1056/NEJMoa1507629]

  3. Langnaese, K., Kloos, D. U., Wehnert, M., Seidel, B., Wieacker, P. Expression pattern and further characterization of human MAGED2 and identification of rodent orthologues. Cytogenet. Cell Genet. 94: 233-240, 2001. [PubMed: 11856887] [Full Text: https://doi.org/10.1159/000048822]

  4. Lucas, S., Brasseur, F., Boon, T. A new MAGE gene with ubiquitous expression does not code for known MAGE antigens recognized by T cells. Cancer Res. 59: 4100-4103, 1999. [PubMed: 10463614]

  5. Reinalter, S., Devlieger, H., Proesmans, W. Neonatal Bartter syndrome: spontaneous resolution of all signs and symptoms. Pediat. Nephrol. 12: 186-188, 1998. [PubMed: 9630034] [Full Text: https://doi.org/10.1007/s004670050433]

  6. Ross, M. T., Grafham, D. V., Coffey, A. J., Scherer, S., McLay, K., Muzny, D., Platzer, M., Howell, G. R., Burrows, C., Bird, C. P., Frankish, A., Lovell, F. L., and 270 others. The DNA sequence of the human X chromosome. Nature 434: 325-337, 2005. [PubMed: 15772651] [Full Text: https://doi.org/10.1038/nature03440]


Contributors:
Marla J. F. O'Neill - updated : 05/17/2016
Victor A. McKusick - updated : 3/21/2005

Creation Date:
Carol A. Bocchini : 12/26/2003

Edit History:
alopez : 09/23/2016
alopez : 05/17/2016
alopez : 3/24/2005
terry : 3/21/2005
terry : 3/3/2005
tkritzer : 12/29/2003
carol : 12/26/2003