Nature Genetics, Published online: 17 February 2025; doi:10.1038/s41588-025-02098-1
Cancer phylogenetic trees describe the evolutionary relationship between primary tumors and metastatic sites. A study now shows that mutations in guanine homopolymer microsatellites represent accurate molecular clocks, revealing the number of cell divisions that have occurred during cancer development and progression.]]>Nature Genetics, Published online: 17 February 2025; doi:10.1038/s41588-025-02083-8
Simultaneous profiling of RNA and chromatin accessibility in single nuclei isolated from human postnatal brain regions from infancy to late adulthood identifies key cellular regulators and nominates target genes and mechanisms for brain-related diseases and disorders.]]>Nature Genetics, Published online: 17 February 2025; doi:10.1038/s41588-024-02071-4
Pangenome analyses of 133 wild accessions of the model bryophyte Marchantia polymorpha identify adaptive features and provide insights into the mechanisms of plant adaptation to the terrestrial environment.]]>Nature Genetics, Published online: 17 February 2025; doi:10.1038/s41588-024-02070-5
Analysis of 4,041 single-nucleotide variants (SNVs) linked to 13 cancers performed in primary human cell types identifies 380 potentially regulatory SNVs and their putative target genes. Editing one SNV, rs10411210 , revealed that the risk allele increases RHPN2 expression and stimulus-responsive RhoA activation.]]>Nature Genetics, Published online: 13 February 2025; doi:10.1038/s41588-025-02081-w
This study identifies candidate safeguard repressor transcription factors that repress alternate lineages in mature cell types and provides functional evidence that Prox1 performs such a function in hepatocytes during reprogramming, regeneration and in cancer.]]>Nature Genetics, Published online: 13 February 2025; doi:10.1038/s41588-025-02085-6
This paper compares the frequency and genetic basis of clonal hematopoiesis in 136,401 admixed American participants from the Mexico City Prospective Cohort with 416,118 largely European ancestry individuals from the UK Biobank cohort.]]>Nature Genetics, Published online: 12 February 2025; doi:10.1038/s41588-025-02104-6
Germline mutations increasing pediatric cancer risk]]>Nature Genetics, Published online: 12 February 2025; doi:10.1038/s41588-025-02102-8
DNA loop extrusion is asymmetric but can switch direction]]>