🔎 💊 Mass screening of contigs for antimicrobial and virulence genes
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Dec 31, 2023 - Perl
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bioinformatics-tool
Here are 424 public repositories matching this topic...
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
bioinformatics chemistry structural-biology molecular-structures protein-structure artificial-intelligence dna protein proteomics docking peptides molecular-biology protein-design protein-protein-interaction swarm-intelligence structural-bioinformatics protein-dna-interactions bioinformatics-tool glowworm-swarm-optimization protein-docking
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Jan 16, 2024 - Python
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
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Dec 11, 2024 - C++
Analyze your RNA sequencing data without writing a single line of code
bioinformatics rna-seq gui-application bioinformatics-pipeline rnaseq transcriptomics rna-seq-analysis bioinformatics-analysis smallrna rna-seq-pipeline bioinformatics-tool smallrna-seq
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Oct 3, 2024 - Python
A modular annotation tool for genomic variants
javascript python bioinformatics genomics python3 bioinformatics-pipeline annotation-tool variant-annotations variant-annotation variant-analysis genomic-data-analysis bioinformatics-tool
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Dec 10, 2024 - JavaScript
📹 Collection of my Youtube Tutorials over the years! Read, write, and share what you create ✨🎈
python google-spreadsheet python-programming openai machinelearning python-webapp google-sheet python-beginners bioinformatics-tool machinelearning-python streamlit openai-api streamlit-components openai-gpt3 streamlit-application streamlit-web-app bioinformatics-python langchain chatgpt3
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Nov 16, 2024 - Python
🚀 seqfu - Sequece Fastx Utilities
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Nov 15, 2024 - Nim
🌺 reference-free transcriptome assembly for short and long reads
rna-seq denovo-assembly single-cell-rna-seq bioinformatics-tool nanopore-sequencing bulk-rna-seq pacbio-sequencing
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Jan 28, 2024 - Java
iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of automated machine-learning pipelines for computational analysis and predictions using nucleic acid and protein sequences.
python machine-learning deep-learning prediction feature-selection sequence-analysis bioinformatics-tool automated-modelling biomedical-data-analytics
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Apr 15, 2024 - Python
Blender plugin to process biological data and molecular work.
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Feb 14, 2022 - Python
Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
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Dec 9, 2024 - R
An implementation of MNN (Mutual Nearest Neighbors) correct in python.
biological-data-analysis batch-effects single-cell-analysis bioinformatics-tool mnn-correct mutual-nearest-neighbor
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Jan 9, 2023 - Python
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
visualization bioinformatics sequencing liftover dna protein alignment fasta fluent ddv msa fasta-sequences bioinformatics-tool chain-alignment fluentdna
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Jul 19, 2021 - JavaScript
Genomics data visualization in Python by using matplotlib.
visualization python bioinformatics data-visualization matplotlib plotting bioinformatics-tool genomics-data-visualization
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Dec 27, 2023 - Python
Plugin for PyCharm / IntelliJ IDEA Platform IDEs which adds support for Snakemake language.
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Nov 14, 2024 - Python
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
bioinformatics genome taxonomy metagenomics classification fasta fastq metagenomes dna-sequences short-read-mapper read-mapping metagenomic-analysis metagenomic-classification genomic-data-analysis bioinformatics-algorithms long-reads metagenomic-data refseq ncbi-refseq bioinformatics-tool
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Oct 1, 2024 - C++
⛓ Correct misassemblies using linked AND long reads
bioinformatics genome-assembly genome-scaffolding 10xgenomics misassembly-correction linked-reads bioinformatics-tool
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Sep 29, 2023 - Python
A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs
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Jul 25, 2024 - Perl
NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.
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Nov 14, 2024 - Python
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