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I am currently a Computation and Informatics in Biology and Medicine (CIBM) postdoctoral fellow at the University of Wisconsin-Madison, but work remotely from Chicago. I received my PhD in Pharmacognosy (focused on microbial specialized metabolism/chemistry) from the Universtiy of Illinois at Chicago where I was an NIH F31 fellow.

I currently write a lot of Python, R, Bash, Nextflow, etc. code. Creating tools for metagenomics, trancriptomics and metabolomics.

I am the creator/maintainer of multiple the R packages including IDBac; Leaflet map of researchers for the American Society of Pharmacognosy; and electricShine/duplipy for creating portable Shiny apps.

2 sponsors have funded chasemc’s work.

@chasemc

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Private Sponsor
@bcrossman

Featured work

  1. chasemc/electricShine

    Create Standalone Installable Shiny Apps

    R 259
  2. chasemc/IDBacApp

    A MALDI Mass Spectrometry Bioinformatics Platform

    R 30
  3. chasemc/mzfinder

    Search LC-MS/MS Precursors against npatlas https://www.npatlas.org

    R 3

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