refid KeyError when adding SNAP "Collocate" node to workflow #189
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Description
Hello, I get an error when trying to create an XML file with the SNAP "Collocate" operator. I haven't encountered this before and the code should be right.
- which operating system are you using?
Windows 8 - which environment is pyroSAR running in?
Anaconda virtual environment - which version of pyroSAR are you using?
Via conda - which function of pyroSAR did you call with which parameters?
# Code that I'm using
workflow = parse_recipe('blank')
read1 = parse_node('Read')
read1.parameters['file'] = dim
workflow.insert_node(read1)
read2 = parse_node('Read')
read2.parameters['file'] = clip_water_mask
read2.parameters['formatName'] = 'GeoTIFF'
workflow.insert_node(read2)
collocate = parse_node('Collocate')
collocate.parameters['masterProductName'] = os.path.basename(dim).rstrip('.dim')
collocate.parameters['renameMasterComponents'] = False
collocate.parameters['renameSlaveComponents'] = False
# This line below raises the error
workflow.insert_node(collocate, before=[read1.id, read2.id])- if applicable, which version of SNAP or GAMMA are you using in pyroSAR?
SNAP - the full error message
File "workflows.py", line 186, in add_water_mask
workflow.insert_node(collocate, before=[read1.id, read2.id])
File "C:\Users\Angelo\Miniconda3\envs\pyrosar\lib\site-packages\pyroSAR\snap\auxil.py", line 892, in insert_node
self.__reset_successor_source(newnode.id)
File "C:\Users\Angelo\Miniconda3\envs\pyrosar\lib\site-packages\pyroSAR\snap\auxil.py", line 788, in __reset_successor_source
reset(id, self[id].source)
File "C:\Users\Angelo\Miniconda3\envs\pyrosar\lib\site-packages\pyroSAR\snap\auxil.py", line 1124, in source
sources.append(element.attrib['refid'])
KeyError: 'refid'I've confirmed that this graph should work in SNAP. I tested it in the GUI. Here is an XML that I created using the graph tool in SNAP GUI.
Open XML from SNAP GUI
<graph id="Graph">
<version>1.0</version>
<node id="Read">
<operator>Read</operator>
<sources/>
<parameters class="com.bc.ceres.binding.dom.XppDomElement">
<file>C:\Users\Angelo\Documents\PANJI\Projects\sar_disaster_assessment\flood\seasonality_120E_20Nv1_3_2020.tif</file>
</parameters>
</node>
<node id="Collocate">
<operator>Collocate</operator>
<sources>
<sourceProduct refid="Read"/>
<sourceProduct.1 refid="Read(2)"/>
</sources>
<parameters class="com.bc.ceres.binding.dom.XppDomElement">
<sourceProductPaths/>
<masterProductName>stack</masterProductName>
<targetProductName>_collocated</targetProductName>
<targetProductType>COLLOCATED</targetProductType>
<renameMasterComponents>false</renameMasterComponents>
<renameSlaveComponents>false</renameSlaveComponents>
<masterComponentPattern>${ORIGINAL_NAME}_M</masterComponentPattern>
<slaveComponentPattern>${ORIGINAL_NAME}</slaveComponentPattern>
<resamplingType>NEAREST_NEIGHBOUR</resamplingType>
</parameters>
</node>
<node id="Read(2)">
<operator>Read</operator>
<sources/>
<parameters class="com.bc.ceres.binding.dom.XppDomElement">
<file>C:\Users\Angelo\Documents\PANJI\Projects\sar_disaster_assessment\flood\output\stack.dim</file>
</parameters>
</node>
<node id="Write">
<operator>Write</operator>
<sources>
<sourceProduct refid="Collocate"/>
</sources>
<parameters class="com.bc.ceres.binding.dom.XppDomElement">
<file>C:\Users\Angelo\Documents\PANJI\Projects\sar_disaster_assessment\flood\output\_collocated.dim</file>
<formatName>BEAM-DIMAP</formatName>
</parameters>
</node>
<applicationData id="Presentation">
<Description/>
<node id="Read">
<displayPosition x="37.0" y="134.0"/>
</node>
<node id="Collocate">
<displayPosition x="246.0" y="133.0"/>
</node>
<node id="Read(2)">
<displayPosition x="27.0" y="186.0"/>
</node>
<node id="Write">
<displayPosition x="453.0" y="136.0"/>
</node>
</applicationData>
</graph>