cellpose
a generalist algorithm for cellular segmentation

Check out full documentation here. For software advice, check out our topic on image.sc. Download the Cellpose dataset here.

✨ NEW RELEASE: Cellpose3: one-click image restoration for improved cellular segmentation ✨


Cellpose 2.0: train a model on your own data in less than an hour: twitter, paper!



Try Cellpose 1.0 by uploading one PNG or JPG <10 MB. Images are resized to a max size of 512x512 pixels.

or click on an example image from our test set: