We did our deck shou sugi ban style. The deck is made of cedar 2x6's, each individually burned on all sides and then treated with lindseed oil. The deck is just 8x25 ft. It did take quite awhile to burn all the boards but I love the look of it so it was worth the effort to me. We just finished it last fall and so far the durability seems ok. It beaded up
water really well all winter but I think we will need to reapply oil annually. We live in a rainforest so it's pretty much always wet so treatment for weather and rot resistance is critical.
On the front of the deck I also build full length planter boxes. These were also done shou sugi ban style. I did a longer burn on them so they are pretty much entirely black but not to the point of the alligator charring. They are only about half full of soil and not planted yet. So I can't really comment on how they'll hold up.
I have done lots of other cedar beds. Some treated with oil others not. Cedar beds will last a really long time on their own so I'm not sure treating with oil really adds that much.
As far as the oils in cedar harming the plants. Its not an issue. Pretty much everyone the gardens in my area uses cedar raised beds (again because we live in a rain forest and need the drainage from the raised beds and the rot resistance of cedar). I've never seen or heard of any ill effect even with fresh cut rough timber being used. What little bit of oil is in the cedar isn't going to have any movement from the boards into the surrounding soil. I frequently have plants that are growing right up against the cedar boards and don't seem to be at all effected. So I don't really think that there is any issue at all.