app vcf_add_ids

Add IDs to VCF records

2 releases

0.1.1 Jul 24, 2023
0.1.0 Jul 24, 2023

#605 in Science

MIT license

600KB
84 lines

vcf id adder

VCF id can be useful for processing.

This is a quick script that assigns IDs in a VCF file based on the position and alleles.

The delimiter can be set. Optionally, a sha1 hash can be use to get an id, which can be more compact.

Dependencies

~2.6–3.5MB
~68K SLoC