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Add assortativity module #122

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merged 19 commits into from
Jun 14, 2022
Merged

Add assortativity module #122

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ee06fa9
feat: added assortativity measures.
nwlandry Jun 5, 2022
480bbbf
fix: fixed the uniform assortativity function.
nwlandry Jun 5, 2022
0cfd033
update
nwlandry Jun 14, 2022
6c1050a
feat: added assortativity measures.
nwlandry Jun 5, 2022
f892799
fix: fixed the uniform assortativity function.
nwlandry Jun 5, 2022
31fbd32
update
nwlandry Jun 14, 2022
44330f4
Merge branch 'add-assortativity' of https://github.com/ComplexGroupIn…
nwlandry Jun 14, 2022
7a8d150
fixed assortativity methods
nwlandry Jun 14, 2022
ddf86bf
upgrade black to 22.3.0
nwlandry Jun 14, 2022
8814659
fix: unused and broken imports
nwlandry Jun 14, 2022
b04e1eb
style: run isort and black
nwlandry Jun 14, 2022
b0ca0e0
fix: updated the `convert_to_graph` method
nwlandry Jun 14, 2022
b012c96
docs: added assortativity docstrings
nwlandry Jun 14, 2022
a82dce2
tests: add unit tests.
nwlandry Jun 14, 2022
78db5e5
style: run isort and black
nwlandry Jun 14, 2022
d209774
fix method
nwlandry Jun 14, 2022
4f2ea71
response to PR
nwlandry Jun 14, 2022
2336878
add note
nwlandry Jun 14, 2022
c54a540
style: run isort and black
nwlandry Jun 14, 2022
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fix: fixed the uniform assortativity function.
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@nwlandry
nwlandry committed Jun 5, 2022
commit 480bbbf9575e8d072329e4e5ab1e9ecabd7112c4
4 changes: 2 additions & 2 deletions xgi/algorithms/assortativity.py
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Original file line number Diff line number Diff line change
Expand Up @@ -60,7 +60,7 @@ def uniform_assortativity(H):
degrees = dict(H.degree())
try:
k1k2 = [[degrees[n] for n in random.sample(H.edges.members(e), 2)] for e in H.edges]
except IndexError:
except ValueError:
raise XGIError("Hypergraph must not have singleton edges.")

return np.corrcoef(*k1k2)[0, 1]
return np.corrcoef(list(zip(*k1k2)))[0, 1]