Tools for importing and exporting VIVO and Vitro triple stores (content and configuration) to and from various RDF formats.

These tools can be used to upgrade from Jena2 to Jena3 triple stores. Export to TriG format using jenatools and import the TriG format using jena3tools.

These tools can be used to export either Jena2 or Jena3 triple stores to other popular RDF formats to create single files for sharing, and analytics.

WARNING: This is beta software. Please be sure your data is backed up and can be restored before using this software. Please report any experiences with this software to [email protected]. Thanks!

Import and export VIVO/Vitro SDB and TDB triples stores in Jena2 format from and to TriG and other RDF formats.

Import and export TriG and other RDF formats to and from VIVO/Vitro SDB and TDB triple stores in Jena3 format.

jena2tools and jena3tools are distributed with VIVO/Vitro 2.0.0-beta releases and can be found in <home>/bin

java -jar jena2tools [arguments] -d home_directory

Arguments
-d, --dir      REQUIRED. Specify the VIVO/Vitro home directory
-i, --import   Import TriG format data to triple stores
-e, --export   Export data from triple stores. Default format is TriG
-h, --help     Display help text
-f, --force    Force overwrite of previous exports
-o, --output   Output format followed by one of nt, nq, trig, rdf, or ttl

java -jar jena3tools [arguments] -d home_directory
    
Arguments
-d, --dir      REQUIRED. Specify the VIVO/Vitro home directory
-i, --import   Import TriG format data to triple stores
-e, --export   Export data from triple stores. Default format is TriG
-h, --help     Display help text
-f, --force    Force overwrite of previous exports
-o, --output   Output format followed by one of nt, nq, jsonld, trig, rdf, or ttl