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experimental-design

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Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially expressed genes. PowsimR is a flexible tool to simulate and evaluate differential expression from bulk and especially single-cell RNA-seq data making it suitable for a priori and posterior power analyses.

  • Updated Aug 1, 2023
  • HTML

A Python Package for intuitive design of experiments with user-friendly analysis of results. The aim is for this package to rival the DOE capabilities of commercial software such as JMP. Currently designs and analysis will be more geared towards investigations following the Response Surface Methodology.

  • Updated Nov 5, 2020
  • Python

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