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@ai-med Lab for Artificial Intelligence in Medical Imaging

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    32 repositories

    • Cor2Vox

      Public
      Official Pytorch Implementation of Paper - 3D Shape-to-Image Brownian Bridge Diffusion for Brain MRI Synthesis from Cortical Surfaces - IPMI 2025
      GNU General Public License v3.0
      •0•2•1•0•Updated Feb 19, 2025Feb 19, 2025

    • OrganDETR

      Public
      0•0•0•0•Updated Feb 18, 2025Feb 18, 2025

    • StablePose

      Public
      Official Pytorch Implementation of Paper - Stable-Pose: Leveraging Transformers for Pose-Guided Text-to-Image Generation - NeurIPS 2024
      Python
      •
      GNU General Public License v3.0
      •4•100•1•0•Updated Dec 23, 2024Dec 23, 2024

    • mlv2-net

      Public
      MLV^2-Net: Rater-Based Majority-Label Voting for Consistent Meningeal Lymphatic Vessel Segmentation
      Python
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Dec 8, 2024Dec 8, 2024

    • SCSR-core

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 21, 2024Nov 21, 2024

    • DiaMond

      Public
      Official pytorch implementation of Paper - DiaMond: Dementia Diagnosis with Multi-Modal Vision Transformers Using MRI and PET - WACV 2025
      Python
      •
      GNU General Public License v3.0
      •1•13•0•0•Updated Nov 5, 2024Nov 5, 2024

    • PASTA

      Public
      Official pytorch implementation of Paper - 🍝 PASTA: Pathology-Aware MRI to PET Cross-modal Translation with Diffusion Models - MICCAI 2024
      Python
      •
      GNU General Public License v3.0
      •3•17•0•0•Updated Oct 23, 2024Oct 23, 2024

    • DAFT

      Public
      Dynamic Affine Feature Map Transform
      Python
      •
      GNU General Public License v3.0
      •4•41•0•0•Updated Jun 14, 2024Jun 14, 2024

    • pcl-protopnet-nw

      Public
      Our work aims to integrate interpretability of neural networks and self-supervised learning on unlabelled datasets.
      Python
      •
      MIT License
      •0•1•0•0•Updated Jun 5, 2024Jun 5, 2024

    • TripletTraining

      Public
      Official PyTorch Implementation for From Barlow Twins to Triplet Training: Differentiating Dementia with Limited Data - MIDL 2024
      Python
      •
      GNU General Public License v3.0
      •1•3•0•0•Updated Apr 9, 2024Apr 9, 2024

    • KeepTheFaith

      Public
      Python
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Apr 8, 2024Apr 8, 2024

    • Vox2Cortex

      Public
      Python
      •
      GNU General Public License v3.0
      •12•66•4•0•Updated Mar 5, 2024Mar 5, 2024

    • PANIC

      Public
      Prototypical Additive Neural Network for Interpretable Classification
      Python
      •
      GNU General Public License v3.0
      •3•13•0•0•Updated Dec 4, 2023Dec 4, 2023

    • HALOS

      Public
      Python
      •
      GNU General Public License v3.0
      •1•4•0•0•Updated Sep 1, 2023Sep 1, 2023

    • abcd_study

      Public
      Jupyter Notebook
      •
      MIT License
      •1•2•0•0•Updated Jul 31, 2023Jul 31, 2023

    • AbdomenNet

      Public
      Python
      •0•4•0•12•Updated Dec 8, 2022Dec 8, 2022

    • causal-effects-in-alzheimers-continuum

      Public
      Code for the paper "Identification of causal effects of neuroanatomy on cognitive decline requires modeling unobserved confounders"
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •2•8•0•0•Updated Nov 24, 2022Nov 24, 2022

    • MetadataNorm

      Public
      Repository for the paper "Metadata Normalization"
      Jupyter Notebook
      •4•0•0•0•Updated Oct 20, 2021Oct 20, 2021

    • STRUDEL

      Public
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 27, 2021Sep 27, 2021

    • SVEHNN

      Public
      Scalable, Axiomatic Explanations of Deep Alzheimer's Diagnosis from Heterogeneous Data (SVEHNN)
      Python
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Sep 23, 2021Sep 23, 2021

    • Dataset-Bias

      Public
      Detect and correct bias in neuroimaging
      R
      •
      Artistic License 2.0
      •110•5•0•0•Updated Apr 13, 2021Apr 13, 2021

    • nn-common-modules

      Public
      Pytorch Implementations of Common modules, blocks and losses for CNNs specifically for segmentation models
      computer-visiondeep-learningpytorchmedical-imagingconvolutional-layerssegmentationdensenetconvolutional-neural-networksencoder-decoderdice-coefficient
      Python
      •
      MIT License
      •16•33•5•0•Updated Feb 2, 2021Feb 2, 2021

    • quickNAT_pytorch

      Public
      PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
      machine-learningquality-controlaicomputer-visiondeep-learninguncertaintymedical-imagingsegmentationbayesianconvolutional-neural-networks
      Python
      •
      MIT License
      •37•103•7•0•Updated Jan 7, 2021Jan 7, 2021

    • point_recalibration

      Public
      Python
      •0•1•0•0•Updated Nov 24, 2020Nov 24, 2020

    • geomdl_anatomical_mesh

      Public
      0•1•0•0•Updated Oct 7, 2020Oct 7, 2020

    • MAS-LR

      Public
      Pytorch Implementation of MAS-LR, a Continual Learning approach for importance driven incremental domain learning. https://arxiv.org/abs/2005.00079
      Python
      •
      MIT License
      •2•2•1•0•Updated Oct 3, 2020Oct 3, 2020

    • almgig

      Public
      Adversarial Learned Molecular Graph Inference and Generation
      chemistrytensorflowgraph-convolutional-networksmolecule-generationdeep-learninggenerative-adversarial-network
      Python
      •
      GNU General Public License v3.0
      •1•8•0•0•Updated Jun 25, 2020Jun 25, 2020

    • squeeze_and_excitation

      Public
      PyTorch Implementation of 2D and 3D 'squeeze and excitation' blocks for Fully Convolutional Neural Networks
      deep-learningsegmentationfully-convolutional-networkssqueeze-and-excitationpytorchconvolutional-networks
      Python
      •
      MIT License
      •52•319•4•0•Updated Jun 23, 2020Jun 23, 2020

    • QuickNATv2

      Public
      Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
      deep-learningneuroscienceneuroanatomy-toolboxbrain-segmentation
      MATLAB
      •
      MIT License
      •17•63•4•0•Updated Apr 9, 2019Apr 9, 2019

    • DeepNAT

      Public
      Caffe implementation of DeepNAT for brain segmentation
      1•4•1•0•Updated Feb 15, 2019Feb 15, 2019