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pyproject.toml
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55 lines (52 loc) · 1.47 KB
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[build-system]
requires = ["poetry-core>=1.0.0", "setuptools>=80.0.0", "wheel>=0.45.0"]
build-backend = "poetry.core.masonry.api"
[tool.poetry]
name = "CyLinter"
version = "0.0.54"
description = "CyLinter: An Interactive Image Segmentation Filter for Multiplex Microscopy"
readme = "README.md"
license = "MIT"
keywords =['CyLinter multiplex microscopy quality control']
classifiers=[
'Development Status :: 4 - Beta',
'Intended Audience :: End Users/Desktop',
'Intended Audience :: Science/Research',
'Framework :: napari',
'License :: OSI Approved :: MIT License',
'Natural Language :: English',
'Operating System :: OS Independent',
'Programming Language :: Python :: 3',
'Topic :: Scientific/Engineering :: Visualization'
]
authors = ["Gregory J. Baker <[email protected]>"]
homepage = "https://github.com/labsyspharm/cylinter"
[tool.poetry.dependencies]
cellcutter = "*"
hdbscan = "*"
joblib = "*"
magicgui = "*"
matplotlib = "*"
napari = "*"
numpy = "<2"
natsort = "*"
numba = "*"
pandas = "*"
pyarrow = "*"
pyqt5 = ">=5.15,<5.16" # ensuring PyQT5
ffmpeg = "*"
pyyaml = "*"
qtpy = "*"
scikit-image = "*"
scikit-learn = "*"
seaborn = "*"
tifffile = "<2023.7"
umap-learn = "*"
zarr = "<3"
numcodecs = "*" # = "<0.12" # ensuring compatibility with Zarr2
svglib = "*"
pypdf2 = "*"
imagecodecs = "*" # MIBI data fails to be read without this
opencv-python = "4.8.*" # ensuring PyQT5 build
[tool.poetry.scripts]
cylinter = "cylinter.cylinter:main"