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dag.yaml
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dag.yaml
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inputs:
input_path_0: FILL THIS VALUE TO RUN THE WORKFLOW
input_path_1: FILL THIS VALUE TO RUN THE WORKFLOW
output_directory_0: FILL THIS VALUE TO RUN THE WORKFLOW
output_file_name_0: FILL THIS VALUE TO RUN THE WORKFLOW
list_tasks:
- func: import_image_workflow
id: a134dcd5-84ac-421e-84ca-3c92fc3f3e7b
images_inputs:
input_path: input_path_0
list_private_parameters:
- image_type
- stack_layout
node_type: root
outputs:
- ovule_sample_fdc536e1-d9fd-4a50-bacf-cc59b5b09e2f
parameters:
image_name: ovule_sample
image_type: raw
key: raw
stack_layout: ZXY
- func: gaussian_smoothing_workflow
id: 90468102-6dcd-4b23-8ca2-7cd87f7bd7ca
images_inputs:
image: ovule_sample_fdc536e1-d9fd-4a50-bacf-cc59b5b09e2f
list_private_parameters: []
node_type: node
outputs:
- ovule_sample_smoothed_c26c08bc-e68d-40c2-8e39-fa7c91262ceb
parameters:
sigma: 1.0
- func: export_image_workflow
id: 99e29181-d10a-4de8-925c-472c0e87a431
images_inputs:
image: ovule_sample_smoothed_c26c08bc-e68d-40c2-8e39-fa7c91262ceb
output_directory: output_directory_0
output_file_name: output_file_name_0
list_private_parameters: []
node_type: leaf
outputs: []
parameters:
custom_key: smoothed
dtype: uint16
file_format: tiff
scale_to_origin: true
plantseg_version: 1.8.1