This homework is due: Friday, 9/27/2019, 11:59 PM.
In this homework, you will be implementing B+ tree indices.
You should watch the B+ Trees lectures before working on this homework.
The test cases for this homework are all located in
src/test/java/edu/berkeley/cs186/database/index
. To build and test your code
in the container, run the following inside /cs186/fa19-moocbase
:
mvn clean test -D HW=2
There should be 16 failures, 4 errors, and 20 tests run.
The index
directory contains a partial implementation of an Alternative 2 B+ tree
(BPlusTree
), an implementation that you will complete in this assignment.
Every B+ tree maps keys of type DataBox
(a single value or "cell" in a table)
to values of type RecordId
. A B+ tree is composed of inner nodes (InnerNode
) and leaf nodes (LeafNode
).
Every B+ tree is persisted to disk (through the Buffer Manager and Disk Space
Manager), and every inner node and leaf node is
stored on its own page. Calls are done through BPlusTree
, which propagate
through zero or more InnerNode
s, and eventually terminate at a LeafNode
.
Both LeafNode
and InnerNode
inherit from BPlusNode
, which has some useful
methods implemented already.
You should read through all of the code in the index
directory. Many comments
contain critical information on how you must implement certain functions. For
example, BPlusNode::put
specifies how to redistribute entries after a
split. You are responsible for reading these comments. If you do not obey
the comments, you will lose points. Here are a few of the most notable
points:
- Our implementation of B+ trees does not support duplicate keys. You will throw an exception whenever a duplicate key is inserted.
- Our implementation of B+ trees assumes that inner nodes and leaf nodes can be serialized on a single page. You do not have to support nodes that span multiple pages.
- Our implementation of delete does not rebalance the tree. Thus, the
invariant that all non-root leaf nodes in a B+ tree of order
d
contain betweend
and2d
entries is broken. Note that actual B+ trees do rebalance after deletion, but we will not be implementing rebalancing trees in this project for the sake of simplicity.
There are a couple of points in this project, where a method will take in objects of the
type LockContext
. You do not need to worry too much about these
objects right now; they will become more relevant in HW4.
If there are any methods you wish to call that require these objects, use the ones
passed in to the method you are implementing, or defined in the class of the method
you are implementing (this.lockContext
for
BPlusTree
and this.treeContext
for InnerNode
and LeafNode
).
You should first implement the fromBytes
in LeafNode
.
This method reads a LeafNode
from a page. For information on how a leaf
node is serialized, see LeafNode::toBytes
. For an example on how to read a node
from disk, see InnerNode::fromBytes
. Note that testToAndFromBytes
will not
pass just from completing this method, you need to complete LeafNode#put
.
After implementing fromBytes
, you will need to implement the following methods
in LeafNode
, InnerNode
, and BPlusTree
:
get
getLeftmostLeaf
(LeafNode
andInnerNode
only)put
remove
bulkLoad
For information on what these methods should do, refer to the comments in
BPlusTree
and BPlusNode
. Do not forget to call sync
when implementing the
three mutating methods (put
, remove
, and bulkLoad
); it's easy to forget.
Each of these methods, although split into three different classes, can be
viewed as one recursive action each - the BPlusTree
method starts the call, the
InnerNode
method is the recursive case, and the LeafNode
method is the base
case. It's suggested that you work on one method at a time (over all three
classes).
You will also need to implement the following methods in BPlusTree
:
scanAll
scanGreaterEqual
In order to implement these, you will have to complete the BPlusTreeIterator
inner class in BPlusTree.java
.
After this, you should pass all the HW2 tests we have provided to you (and any you
add yourselves). These are all the provided tests in database.index.*
.
To help you debug, we have implemented the toDotPDFFile
method of BPlusTree
.
You can add a call to this method in a test to generate a PDF file of your B+
tree.
For example,
BPlusTree tree = ...
tree.toDotPDFFile("tree.pdf");
If you get "Cannot run program "dot"
, and are running your code inside the
container, run the following (inside your container) and then try again:
sudo apt-get update
sudo apt-get install -y graphviz
If you are running this outside your container (inside your IDE, for example),
you need to install GraphViz.
Alternatively, you can run the following inside your container after the
exception is thrown to manually generate a PDF file from the tree.dot
file:
dot -T pdf tree.dot -o out.pdf
See the main readme for submission instructions. The homework number for this homework is hw2.
You may not modify the signature of any methods or classes that we provide to you, but you're free to add helper methods.
You should make sure that all code you modify belongs to files with HW2 todo comments in them (e.g. don't add helper methods to DataBox). A full list of files that you may modify follows:
- index/BPlusTree.java
- index/InnerNode.java
- index/LeafNode.java
Make sure that your code does not use any static (non-final) variables - this may cause odd behavior when running with maven vs. in your IDE (tests run through the IDE often run with a new instance of Java for each test, so the static variables get reset, but multiple tests per Java instance may be run when using maven, where static variables do not get reset).
We strongly encourage testing your code yourself. The given tests for this project are not comprehensive tests: it is possible to write incorrect code that passes them all (but not get full score).
Things that you might consider testing for include: anything that we specify in the comments or in this document that a method should do that you don't see a test already testing for, and any edge cases that you can think of. Think of what valid inputs might break your code and cause it not to perform as intended, and add a test to make sure things are working.
To help you get started, here is one case that is not in the given tests (and
will be included in the hidden tests): everything should work properly even if we
delete everything from the BPlusTree (iterator should immediately return false
for hasNext
).
To add a unit test, open up the appropriate test file (in src/test/java/edu/berkeley/cs186/database/index
) and simply
add a new method to the file with a @Test
annotation, for example:
@Test
public void testEverythingDeleted() {
// your test code here
}
Many test classes have some setup code done for you already: take a look at other tests in the file for an idea of how to write the test code.
- 60% of your grade will be made up of tests released to you (the tests that we provided in
database.index.*
). - 40% of your grade will be made up of hidden, unreleased tests that we will run on your submission after the deadline.