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Commits on Jan 17, 2020

• Merge pull request #29 from Phhere/patch-1

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  nspies

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• Fix undefined variable

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  Phhere

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Commits on Oct 12, 2019

• Merge pull request #18 from sethnr/master

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  nspies

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Commits on Sep 12, 2018

• Update README.rst

  nspies

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• Added link to optional rpy2 installation

  nspies

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Commits on Apr 26, 2018

• Update requirements.txt

  nspies

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Commits on Apr 2, 2018

• yet another networkx 2.0 fix

  

  Noah Spies

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Commits on Mar 28, 2018

• deleted funcs to remove small chrs

  

  sredmond

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• decrufting

  

  sredmond

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• cf barcodes to good barcode IDs in chunks (numpy.isin locking up with > 5e6 records)

  

  sredmond

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• Merge github.com:grocsvs/grocsvs

  

  sredmond

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Commits on Mar 27, 2018

• fix for networkx 2 compatibility; require nx>=2.0 for setup

  

  Noah Spies

  committed
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Commits on Mar 13, 2018

• adding np.array before astype() as fix for #16

  

  Noah Spies

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Commits on Dec 14, 2017

• more fixes for networkx compatibility

  

  Noah Spies

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Commits on Dec 13, 2017

• revert some of previous changes to maintain compatibility between networkx versions

  

  Noah Spies

  committed
  20d4011

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• fixing some incompatibilities with networkx 2.0

  

  Noah Spies

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Commits on Jul 24, 2017

• readme now better describes graphviz dependency

  nspies

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Commits on Jul 20, 2017

• Readme updated to note python3 incompatibility

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  nspies

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Commits on Jun 14, 2017

• a bit better reporting

  

  Noah Spies

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• adding support for saving unmatched barcodes; this allows optionally specifying zero samples

  

  Noah Spies

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Commits on Jun 9, 2017

• Create README.rst

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  nspies

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Commits on Jun 7, 2017

• updating docker

  

  Noah Spies

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• pegging earlier version of numpy to reduce the number of float slice indexing errors (at least when running from docker)

  

  Noah Spies

  committed
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• releasing version 0.2.6

  

  Noah Spies

  committed
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• Merge branch 'master' of github.com:grocsvs/grocsvs

  

  Noah Spies

  committed
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• another fix for compatibility with the latest numpy

  

  Noah Spies

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Commits on Jun 6, 2017

• Merge branch 'docker_rpy2'

  

  Noah Spies

  committed
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• updating docker to use latest grocsvs release v0.2.5

  

  Noah Spies

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• updating docker image to include rpy2 (needs testing)

  

  nspies

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• updating version number to 0.2.5

  

  Noah Spies

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• fixing problem with visualizing completely empty triangles

  

  Noah Spies

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Commits on May 31, 2017

• fixing VCF header int->Integer format code

  

  nspies

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• removing trailing spaces when generating vcf header

  

  nspies

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• Merge branch 'master' of github.com:grocsvs/grocsvs

  

  Noah Spies

  committed
  32ecbb4

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• fixing bug with clustering which very rarely leads to multiple breakpoints coming from the same coordinate/orientation

  

  Noah Spies

  committed
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