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Incorrect template length output

Status: Open.

#54 In arshajii/ema;

· pdimens opened on Apr 19, 2024

Barcodes not encoded/decoded correctly for haplotag reads.

Status: Open.

#53 In arshajii/ema;

· pontushojer opened on Jun 22, 2023

Not all input reads are included in ema align output

Status: Open.

#52 In arshajii/ema;

· pontushojer opened on Jun 22, 2023

EMA split-read handling

Status: Open.

#46 In arshajii/ema;

· pdimens opened on May 18, 2023

Can it used for read of length 500bp ?

Status: Open.

#45 In arshajii/ema;

· volcano1998 opened on Feb 24, 2023

ema align errors

Status: Open.

#44 In arshajii/ema;

· arka-pal opened on Mar 8, 2022

What's the meaning of density probs?

Status: Open.

#43 In arshajii/ema;

· ZhangZhenmiao opened on Feb 16, 2022

Why is read density optimization off by default?

Status: Open.

#40 In arshajii/ema;

· RNieuwenhuis opened on Dec 12, 2020

ema align output SAM parsing error

Status: Open.

#39 In arshajii/ema;

· pontushojer opened on Oct 21, 2020

ema-bin-??? and possible preproc failure

Status: Open.

#38 In arshajii/ema;

· michaeljmetzger opened on Jul 23, 2020

8 bp whitelist

Status: Open.

#37 In arshajii/ema;

· michaeljmetzger opened on Jul 8, 2020

Input and workflow unclear

Status: Open.

#36 In arshajii/ema;

· RNieuwenhuis opened on Mar 27, 2020