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functional annotation updates #230

@amcooksey

Description

@amcooksey

first thoughts on how to do updates:
-re-run functional annotation pipeline
-copy new functional annotation directory to analysis folder (preferrably on apollo-stage, otherwise CERES)
-re-run final-workflow.cwl to generate genomic_annotated.gff (or possibly just the gff annotation portion; preferrably on apollo-stage)
-remove NCBI ref track from apollo (there may be more steps necessary here)
-add new NCBI ref track (there may be more steps necessary here)
-push changes to apollo-prod, i5k-stage, i5k-prod
-re-run createsymlinks
-update tripal functional annotation page

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