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Referring to Ensembl/VEP_plugins#638, it is found in spliceai_scores.masked.snv.hg38.vcf.gz that there are some variants having different scores (even they are having the same gene symbol), e.g.:
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2 241813895 . A T . . SpliceAI=T|NEU4|0.00|0.00|0.11|0.00|31|0|-2|33
2 241813895 . A T . . SpliceAI=T|NEU4|0.00|0.00|0.70|0.00|-28|0|-2|33
...
19 39885875 . G C . . SpliceAI=C|FCGBP|0.18|0.94|0.00|0.00|25|-3|25|-23
19 39885875 . G C . . SpliceAI=C|FCGBP|0.25|0.00|0.00|0.00|25|-3|25|-23
...
Are these cases expected? If so how should we interpret such records?
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