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Python Data Science

Description

A collection of data science scripts for data analysis in Python.

Python libraries used:

  • Numpy
  • Scikit Learn
  • Pandas
  • Seaborn
  • Matplotlib

Installation

To install all of the libraries, run the commands in the "install.txt" file. These are:

  • sudo apt-get install python-pip
  • sudo pip install numpy scipy
  • sudo pip install pandas
  • sudo apt-get install python-matplotlib
  • sudo pip install -U scikit-learn
  • sudo pip install tabulate

Files

  • helpers.py: Helper functions. adapted from the Python Machine Learning repository
  • explore_wine_data.py: Exploratory data analysis of the wine dataset from sklearn using visualisations. Includes data analysis using histogram, scatterplot, bee swarm plot, and cumulative distribution function.
  • statistics_iris.py: Compute various statistics of the iris dataset features such as histogram, min, max, median, mean, and variance.
  • covariance_boston.py: Compute the covariance matrix of the Boston Housing dataset. These matrices can sometimes give faster insight into which variables are related rather than creating scatter plots.

Information

Exploratory Data Analysis

  • Histogram: A histogram is a graphical method of displaying quantitative data. A histogram displays the single quantitative variable along the x axis and frequency of that variable on the y axis. The distinguishing feature of a histogram is that data is grouped into "bins", which are intervals on the x axis.
  • Scatterplot: A scatter plot is a graphical method of displaying the relationship between data points. Each feature variable is assigned an axis. Each data point in the dataset is then plotted based on its feature values.
  • Beeswarm Plot: A Beeswarm plot is a two-dimensional visualisation technique where data points are plotted relative to a fixed reference axis so that no two datapoints overlap. The beeswarm plot is a useful technique when we wish to see not only the measured values of interest for each data point, but also the distribution of these values.
  • Cumulative Distribution Function: The cumulative distribution function (cdf) is the probability that a variable takes a value less than or equal to x. For example, we may wish to see what percentage of the data has a certain feature variable that is less than or equal to x.

Statistics

  • Mean and Median: Both of these show a type of "average" or "center" value for a particular feature variable. The mean is the more literal and precise center; however median is much more robust to outliers which may pull the mean value calculation far away from the majority of the values.
  • Variance and Standard Deviation: Useful for seeing to what degree the feature variable of a dataset varies across all example i.e are most of the values for this particular feature variable similar across the dataset or are they all very different.
  • Covariance Matrix: The covariance of two variables measures how "correlated" they are. If the two variables have a positive covariance, then one when variable increases so does the other; with a negative covariance the values of the feature variables will change in opposite directions. The magnitude of the covariance determines how strongly the features are correlated. A high covariance value means that when one of the feature variables changes by an amount x, the other will change by an amount very close to x; vice versa for low covariance values.

Examples

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Data Science analysis and visualization using Python.

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