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Commits on Jan 14, 2023

• profile rlease opt set to 3

  

  Chubak-ENIAC

  committed
  152a92a

• increased version

  

  Chubak-ENIAC

  committed
  a9ba39f

• made it work with small files

  

  Chubak-ENIAC

  committed
  22a57db

Commits on Jan 13, 2023

• added vecio

  

  Chubak-ENIAC

  committed
  ca9ddd7

Commits on Jan 5, 2023

• Implements reference distance rework

  mvalentine65

  committed
  b5afab2

Commits on Dec 29, 2022

• Tentaive reference matrix creation in parallel.

  mvalentine65

  committed
  b73d3af

Commits on Dec 28, 2022

• Minor housekeeping

  mvalentine65

  committed
  404f6df

• Adds make_indices and begins ref_distance rework

  mvalentine65

  committed
  03e6bd7

Commits on Dec 27, 2022

• Implements split_sequences() as rust function find_references_and_candidates()

  mvalentine65

  committed
  98b012b

Commits on Dec 1, 2022

• changes metadata

  mvalentine65

  committed
  89a0b3f

• changes metadata

  mvalentine65

  committed
  e738c21

• changes secrets in workflow yaml

  mvalentine65

  committed
  6c85ce4

• changes module name in lib.rs

  mvalentine65

  committed
  0cf5800

• Changes Cargo.toml to reflect shift to phymmr_tools

  mvalentine65

  committed
  494c3db

• Adds "ZJBOU" to acceptable characters.

  mvalentine65

  committed
  58d353f

Commits on Oct 20, 2022

• toml changes

  mvalentine65

  committed
  4ff581a

• Adds cluster_distance_filter() with basic test file

  mvalentine65

  committed
  4084983

Commits on Oct 18, 2022

• Starts feature branch for clusters

  mvalentine65

  committed
  142a55f

Commits on Oct 17, 2022

• Adds fasta_reader()

  mvalentine65

  committed
  6876d18

Commits on Oct 16, 2022

• Updates version in Cargo.toml

  mvalentine65

  committed
  9b9bc15

• includes hamming tests

  mvalentine65

  committed
  14c8b21

• Changes Cargo.toml dependencies

  mvalentine65

  committed
  d228c29

• Adds two hamming distance functions

  mvalentine65

  committed
  615de24

Commits on Oct 9, 2022

• Adds bio_revcomp

  mvalentine65

  committed
  757fcd0

Commits on Oct 8, 2022

• Adds reverse_complement() and batch_reverse_complement()

  mvalentine65

  committed
  7a585b4

Commits on Oct 5, 2022

• Adds manylinux docker files

  mvalentine65

  committed
  480521b

Commits on Apr 16, 2022

• Adds seperate outlier check for rust version. Cleans up dead code. Adds input validation to rust library.

  mvalentine65

  committed
  b770619

Commits on Apr 13, 2022

• Changes Cargo.toml

  mvalentine65

  committed
  6c9fbed

• Adds base files for outlier check and rust distance function.

  mvalentine65

  committed
  52785e6

• Initial commit

  mvalentine65

  authored
  67c9f77