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Updated manuscript: references cleanup #226

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jharenza opened this issue Mar 31, 2022 · 2 comments
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Updated manuscript: references cleanup #226

jharenza opened this issue Mar 31, 2022 · 2 comments
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What section of the manuscript should be updated?

References - some are not being rendered properly (eg: https://doi.org/10.1101/cshperspect.a026187 has only one word of the title, some other URL references will need titles, date accessed, etc for submission)

Proposed changes

Not sure how we will fix these. cc @jaclyn-taroni

Relevant literature

this is the literature
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https://github.com/AlexsLemonade/OpenPBTA-manuscript/blob/6646649d97ed44090f708ce546bd5102a7abab76/USAGE.md#citations

  1. URL / webpage, cite like @https://nyti.ms/1QUgAt1. URL citations can be helpful if the above methods return incorrect metadata. For example, @doi:10.1038/ng.3834 incorrectly handles the consortium name resulting in a blank author, while @https://doi.org/10.1038/ng.3834 succeeds. Similarly, @https://doi.org/10.1101/142760 is a workaround to set the journal name of bioRxiv preprints to bioRxiv.

And if that doesn't work

  1. For references that do not have any of the above persistent identifiers, the citation key does not need to include a prefix. Citing @old-manuscript will work, but only if reference metadata is provided manually.

@jharenza jharenza mentioned this issue Apr 18, 2022
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@jharenza jharenza self-assigned this Apr 20, 2022
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done in #245

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