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Featured article: Dynamic co-evolution of transposable elements and the piRNA pathway in African cichlid fishes

Featured article: MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

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X-Mapper: fast and accurate sequence alignment via gapped x-mers

Authors: Jeffry M. Gaston, Eric J. Alm and An-Ni Zhang

Content type: Research 22 January 2025
Dynamic co-evolution of transposable elements and the piRNA pathway in African cichlid fishes

Authors: Miguel Vasconcelos Almeida, Moritz Blumer, Chengwei Ulrika Yuan, Pío Sierra, Jonathan L. Price, Fu Xiang Quah, Aleksandr Friman, Alexandra Dallaire, Grégoire Vernaz, Audrey L. K. Putman, Alan M. Smith, Domino A. Joyce, Falk Butter, Astrid D. Haase, Richard Durbin, M. Emília Santos…

Content type: Research 22 January 2025
MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

Authors: Alan F. Rubin, Jeremy Stone, Aisha Haley Bianchi, Benjamin J. Capodanno, Estelle Y. Da, Mafalda Dias, Daniel Esposito, Jonathan Frazer, Yunfan Fu, Sally B. Grindstaff, Matthew R. Harrington, Iris Li, Abbye E. McEwen, Joseph K. Min, Nick Moore, Olivia G. Moscatelli…

Content type: Database 21 January 2025
Alternative silencing states of transposable elements in Arabidopsis associated with H3K27me3

Authors: Valentin Hure, Florence Piron-Prunier, Tamara Yehouessi, Clémentine Vitte, Aleksandra E. Kornienko, Gabrielle Adam, Magnus Nordborg and Angélique Déléris

Content type: Research 20 January 2025
Enhancer regulatory networks globally connect non-coding breast cancer loci to cancer genes

Authors: Yihan Wang, Daniel A. Armendariz, Lei Wang, Huan Zhao, Shiqi Xie and Gary C. Hon

Content type: Research 17 January 2025

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A survey of best practices for RNA-seq data analysis

Authors: Ana Conesa, Pedro Madrigal, Sonia Tarazona, David Gomez-Cabrero, Alejandra Cervera, Andrew McPherson, Michał Wojciech Szcześniak, Daniel J. Gaffney, Laura L. Elo, Xuegong Zhang and Ali Mortazavi

Content type: Review 26 January 2016

The Erratum to this article has been published in Genome Biology 2016 17:181
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Authors: Michael I Love, Wolfgang Huber and Simon Anders

Content type: METHOD 5 December 2014
The Kardashian index: a measure of discrepant social media profile for scientists

Authors: Neil Hall

Content type: Comment 30 July 2014
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

Authors: Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe and Frank Speleman

Content type: Research 18 June 2002
Differential expression analysis for sequence count data

Authors: Simon Anders and Wolfgang Huber

Content type: Method 27 October 2010

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Genome Biology

Featured Articles

Featured article: Dynamic co-evolution of transposable elements and the piRNA pathway in African cichlid fishes

Featured article: MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

Latest Collections Open for Submissions

Articles

X-Mapper: fast and accurate sequence alignment via gapped x-mers

Dynamic co-evolution of transposable elements and the piRNA pathway in African cichlid fishes

MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

Alternative silencing states of transposable elements in Arabidopsis associated with H3K27me3

Enhancer regulatory networks globally connect non-coding breast cancer loci to cancer genes

A survey of best practices for RNA-seq data analysis

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

The Kardashian index: a measure of discrepant social media profile for scientists

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

Differential expression analysis for sequence count data

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Integrating pharmacogenomics and cheminformatics with diverse disease phenotypes for cell type-guided drug discovery

Nanopore-based random genomic sampling for intraoperative molecular diagnosis

Meta-analyses of mouse and human prostate single-cell transcriptomes reveal widespread epithelial plasticity in tissue regression, regeneration, and cancer

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