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Commits on Nov 19, 2024

• Boltz: Add smiles lookup from compound name from PubChem API

  milot-mirdita

  committed
  e2ca9e8

Commits on Nov 18, 2024

• Switch to High RAM type

  martin-steinegger

  committed
  0b6d456

• Download boltz weights from R2

  milot-mirdita

  committed
  15050d8

• Fix homo-x-mer

  martin-steinegger

  committed
  7932813

• Update README.md

  martin-steinegger

  authored
  0dc137f

• Update name

  martin-steinegger

  authored
  6178340

Commits on Nov 17, 2024

• Add DNA support

  martin-steinegger

  committed
  79244d9

• Add CCD support to Boltz Colab

  martin-steinegger

  committed
  999a9e0

• Add warning and clear cells

  martin-steinegger

  committed
  1a941a8

• First try Boltz notebook

  martin-steinegger

  committed
  b339885

Commits on Oct 17, 2024

• adding link to nature protocols

  sokrypton

  committed
  c21e176

Commits on Oct 15, 2024

• Fixing Conda

  sokrypton

  committed
  d7f184c

• Fixing Conda

  sokrypton

  committed
  b7e015f

Commits on Aug 31, 2024

• Merge pull request #534 from teodorpopescuQB/main

  YoshitakaMo

  authored
  4e198f5

Commits on Aug 17, 2024

• Fix pandas trying to guess dtypes and breaking on invalid job names when reading input

  milot-mirdita

  committed
  fdf3b23

Commits on Aug 16, 2024

• use template_db to print PDB IDs in the resultant m8 file

  YoshitakaMo

  committed
  c21e7a0

• fix unpackdb process in use_templates

  YoshitakaMo

  committed
  55ac663

Commits on Jul 22, 2024

• Support aarch64 with pip (#639)

  wahabk

  authored
  1ccca5a

Commits on Jul 14, 2024

• Fix tests

  milot-mirdita

  committed
  800bd5f

• colabfold_search : allow continuing interrupted runs, disabling unpacking databases

  milot-mirdita

  committed
  f4d9e37

Commits on Jul 11, 2024

• removed ,<3.12 for causing installation issues (#631)

  KeaunAmani

  authored
  a9293c9

Commits on May 12, 2024

• specify biopython==1.81 version while installing (#622)

  sid-betalol

  authored
  1648d23

Commits on May 3, 2024

• Expose env pairing to cli

  milot-mirdita

  committed
  57b220e

Commits on May 2, 2024

• add environmental pairing feature (#614)

  

  endixk

  and

  milot-mirdita

  authored
  07644a8

Commits on Apr 25, 2024

• Skip MSA search when both custom_template and single_sequence provided

  YoshitakaMo

  authored
  1653605

Commits on Apr 23, 2024

• pushing A100 fix (default jaxlib not compatible with A100)

  sokrypton

  committed
  9a5c316

Commits on Apr 15, 2024

• fixing RF2 for symmetry

  sokrypton

  committed
  a69c85f

Commits on Mar 31, 2024

• Reduce log output of MMseqs2 in colabfold_search

  milot-mirdita

  committed
  61df3b8

• Add ungapped-prefilter mode to colabfold_search

  milot-mirdita

  committed
  be06b20

Commits on Mar 29, 2024

• fix param switch (need some time for download to start)

  sokrypton

  committed
  fe88237

Commits on Mar 20, 2024

• reverting RoseTTAFold2 to default params

  sokrypton

  committed
  0614fdf

• updating RoseTTAFold2 notebook to remove output example

  sokrypton

  committed
  6d2969f

Commits on Mar 8, 2024

• Fix cf-af2 notebooks to work on TPU again

  milot-mirdita

  committed
  2dca108

Commits on Mar 7, 2024

• Update dm-haiku to 0.0.12

  milot-mirdita

  committed
  1abdc19

• colabfold_search: fix logger not printing anything

  milot-mirdita

  committed
  04d037c

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