Skip to content

nf-aggregate does not work without connection to public internet  #60

Open
@adamrtalbot

Description

Description of the bug

When using nf-aggregate in a restricted (offline) environment nf-aggregate fails because the Grape library fails to grab the dependency wslite.

The issue appears to stem from this function which imports the wslite error to handle

@Grab('com.github.groovy-wslite:groovy-wslite:1.1.2;transitive=false')

Command used and terminal output

nextflow run 'https://github.com/seqeralabs/nf-aggregate' -name ecstatic_sanger -params-file 'https://seqera.ai/api/ephemeral/woIT1iLPJe2LucqROY9VMw.yaml' -with-tower 'https://seqera.ai/api' -r 0.4.0

Relevant files

Redacted example file:
nf-5twwCthyo4HUhA.log

System information

All without internet connection.

Metadata

Assignees

No one assigned

    Labels

    bugSomething isn't working

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions