# Generated by roxygen2: do not edit by hand

export(.ssrc.mascot)

export(NB.unambiguous)

export(NB.unique)

export(compose_GPGx8cTerm)

export(compose_GPx10R)

export(compose_GSx7cTerm)

export(getExperimentHubFilename)

export(getFC)

export(getNB)

export(nanobodyFlycodeLinking.as.fasta)

export(nanobodyFlycodeLinking.summary)

export(plot_in_silico_LCMS_map)

export(runNGSAnalysis)

export(twoPatternReadFilter)

import(Biostrings)

import(ShortRead)

importFrom(AnnotationHub,query)

importFrom(Biostrings,vmatchPattern)

importFrom(ExperimentHub,ExperimentHub)

importFrom(gplots,hist2d)

importFrom(grDevices,dev.off)

importFrom(grDevices,heat.colors)

importFrom(grDevices,pdf)

importFrom(grDevices,png)

importFrom(grDevices,rgb)

importFrom(graphics,abline)

importFrom(graphics,axis)

importFrom(graphics,barplot)

importFrom(graphics,legend)

importFrom(graphics,plot)

importFrom(protViz,parentIonMass)

importFrom(protViz,ssrc)

importFrom(stats,aggregate)

importFrom(stats,coef)

importFrom(stats,cor)

importFrom(stats,lm)

importFrom(stats,median)

importFrom(utils,packageVersion)

importFrom(utils,read.table)

importFrom(utils,write.table)