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DESCRIPTION
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DESCRIPTION
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Package: NestLink
Type: Package
Title: NestLink an R data package to guide through Engineered Peptide Barcodes
for In-Depth Analyzes of Binding Protein Ensembles
Authors@R: c(person("Pascal", "Egloff",
email = "[email protected]",
role = c("aut"),
comment = c(ORCID = "0000-0001-8948-3704")),
person("Iwan", "Zimmermann",
email = "[email protected]",
comment = c(ORCID = "0000-0003-3476-4749")),
person("Fabian M.", "Arnold",
email = ""),
person("Cedric A.J.", "Hutter",
email = "",
comment = c(ORCID = "0000-0002-8920-3343")),
person("Damien", "Morger",
email = ""),
person("Lennart", "Opitz",
email = "[email protected]",
role = c("aut"),
comment = c(ORCID = "0000-0001-7945-6737")),
person("Lucy", "Poveda",
email = "[email protected]",
role = "ctb",
comment = c(ORCID = "0000-0002-5291-5582")),
person("Hans-Anton", "Keserue",
email = ""),
person("Christian", "Panse",
email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-1975-3064")),
person("Bernd", "Roschitzki",
email = "[email protected]",
role = c("aut"),
comment = c(ORCID = "0000-0001-5756-9773")),
person("Markus", "Seeger",
role = c("aut"),
email = "[email protected]",
comment = c(ORCID = "0000-0003-1761-8571")))
Version: 0.99.88
Depends: R (>= 3.6),
AnnotationHub (>= 2.15.3),
ExperimentHub (>= 0.99.6),
Biostrings (>= 2.51.1),
gplots (>= 3.0.0),
protViz (>= 0.4.0),
ShortRead (>= 1.41.0)
Imports: grDevices, graphics, stats, utils
Description: Provides next-generation sequencing (NGS) and mass spectrometry
(MS) sample data, code snippets and replication material used for developing
NestLink. The NestLink approach is a protein binder selection and
identification technology able to biophysically characterize thousands of
library members at once without handling individual clones at any stage of the
process. Data were acquired on NGS and MS platforms at the
Functional Genomics Center Zurich.
License: GPL
VignetteBuilder: knitr
Suggests: BiocStyle (>= 2.2.0),
DT,
ggplot2,
knitr,
rmarkdown,
testthat,
specL,
lattice,
scales
NeedsCompilation: no
biocViews: ExperimentHub, ExperimentData, SequencingData, MassSpectrometryData,
ReproducibleResearch
RoxygenNote: 6.1.1