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Commits on Sep 20, 2024

• Bump version: 0.1.20 → 0.2.0

  zhiaos

  committed
  f641a2f

• fix bug in assembling features from computed feature arrays

  zhiaos

  committed
  bdfbbb5

Commits on Aug 30, 2024

• update README

  zhiaos

  committed
  6137360

Commits on May 20, 2024

• fix typo

  zhiaos

  committed
  8f53b29

Commits on Mar 1, 2024

• Bump version: 0.1.19 → 0.1.20

  zhiaos

  committed
  45a89f8

• use pandas corr function to compute pcc

  zhiaos

  committed
  8c3e9af

Commits on Jan 29, 2024

• Bump version: 0.1.18 → 0.1.19

  zhiaos

  committed
  ba800f0

• update README

  zhiaos

  committed
  0cd27b9

Commits on Nov 1, 2023

• update hyperparamter grid for xgboost

  zhiaos

  committed
  290e8c6

Commits on Oct 31, 2023

• use larger sample size for detecting csv delimiter

  zhiaos

  committed
  2c69dc3

Commits on Oct 30, 2023

• xgbclassifier: not using early stopping, remove eval_metric

  zhiaos

  committed
  9f28f22

Commits on Oct 27, 2023

• Bump version: 0.1.17 → 0.1.18

  zhiaos

  committed
  2f82935

• fix typo

  zhiaos

  committed
  78ab6aa

Commits on Oct 26, 2023

• Bump version: 0.1.16 → 0.1.17

  zhiaos

  committed
  1922cc3

• output network edge list files with prediction probabilities

  zhiaos

  committed
  9975fd6

• Bump version: 0.1.15 → 0.1.16

  zhiaos

  committed
  92e40ee

• fix wrong feature dictionary returned after computing features

  zhiaos

  committed
  2d6d8b6

Commits on Oct 25, 2023

• dependencies now uses fixed version

  zhiaos

  committed
  3ad6bd9

Commits on Oct 23, 2023

• Bump version: 0.1.14 → 0.1.15

  zhiaos

  committed
  d528ef3

• user specifiied llr cutoff may be too large. set the cutoff to the largest possible value

  zhiaos

  committed
  e14c5f9

Commits on Oct 19, 2023

• Bump version: 0.1.13 → 0.1.14

  zhiaos

  committed
  c30db88

• update seaborn version requirement

  zhiaos

  committed
  137955b

• update setup.py

  zhiaos

  committed
  a7e6cf0

• Bump version: 0.1.12 → 0.1.13

  zhiaos

  committed
  25cf418

Commits on Aug 21, 2023

• llr calcuation performance improvement

  zhiaos

  committed
  674b8af

• save trained model

  zhiaos

  committed
  cfddb5c

Commits on Aug 20, 2023

• when downloding file from url, check md5 if provided

  zhiaos

  committed
  ae3e8f0

Commits on Aug 19, 2023

• for protein cofunction prediction, train models with or without PPI

  zhiaos

  committed
  84b3195

Commits on Aug 16, 2023

• plot protein rna llr pair: specify feature type

  zhiaos

  committed
  4be6958

• computer llr and update plotting

  zhiaos

  committed
  0967a63

Commits on Aug 15, 2023

• support for using ppi feature

  zhiaos

  committed
  65bdbd9

• fast feature computation

  zhiaos

  committed
  266e1fd

Commits on Aug 7, 2023

• provide option to force clean old runs

  zhiaos

  committed
  ea118d4

Commits on Aug 3, 2023

• add logging

  zhiaos

  committed
  d75d173

Commits on Aug 2, 2023

• save config as yaml file

  zhiaos

  committed
  8fd1fd4

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