useDynLib(CDM)

####################################################

############# IMPORTS ##############################

#***************************************************

#*************** R Basics / Linking To *************

importFrom(graphics, abline)

importFrom(graphics, axis)

importFrom(graphics, barplot)

importFrom(graphics, hist)

importFrom(graphics, legend)

importFrom(graphics, lines)

importFrom(graphics, par)

importFrom(graphics, plot)

importFrom(graphics, points)

importFrom(graphics, rect)

importFrom(graphics, text)

importFrom(grDevices, dev.off)

importFrom(grDevices, pdf)

importFrom(methods, is)

importFrom(Rcpp, evalCpp)

importFrom(stats, aggregate)

importFrom(stats, anova)

importFrom(stats, as.formula)

importFrom(stats, coef)

importFrom(stats, confint)

importFrom(stats, cor)

importFrom(stats, cov2cor)

importFrom(stats, dnorm)

importFrom(stats, fitted)

importFrom(stats, lm)

importFrom(stats, loess)

importFrom(stats, logLik)

importFrom(stats, median)

importFrom(stats, model.matrix)

importFrom(stats, na.omit)

importFrom(stats, p.adjust)

importFrom(stats, pchisq)

importFrom(stats, plogis)

importFrom(stats, pnorm)

importFrom(stats, predict)

importFrom(stats, qlogis)

importFrom(stats, qnorm)

importFrom(stats, rbinom)

importFrom(stats, runif)

importFrom(stats, sd)

importFrom(stats, terms)

importFrom(stats, vcov)

importFrom(stats, weighted.mean)

importFrom(utils, combn)

importFrom(utils, flush.console)

importFrom(utils, packageDescription)

importFrom(utils, sessionInfo)

#***************************************************

#************** Depends ****************************

import(mvtnorm)

#***************************************************

#************** Imports ****************************

importFrom(polycor, polychor)

#***************************************************

#************** Suggests ****************************

# requireNamespace("another_package")

# CDM_require_namespace("CDM_another_package")

# importFrom(BIFIEsurvey, BIFIE.data.jack)

# importFrom(BIFIEsurvey, BIFIE.data.boot)

# importFrom(lattice, xyplot)

# importFrom(MASS, ginv)

# importFrom(psych, fa)

# importFrom(sfsmisc, QUnif)

# importFrom(sirt, rowCumsums.sirt)

# importFrom(sirt, rowIntervalIndex.sirt)

########################################################

################ EXPORTS ###############################

export(abs_approx)

export(abs_approx_D1)

export(cat_paste)

export(cdi.kli)

export(cdm.est.class.accuracy)

export(cdm_attach_internal_function)

export(cdm_calc_information_criteria)

export(cdm_fa1)

export(cdm_fit_normal)

export(cdm_fit_normal)

export(cdm_matrix1)

export(cdm_matrix2)

export(cdm_matrixstring)

export(cdm_parameter_regularization)

export(cdm_pem_acceleration)

export(cdm_pem_acceleration_assign_output_parameters)

export(cdm_pem_inits)

export(cdm_pem_inits_assign_parmlist)

export(cdm_penalty_threshold_elnet)

export(cdm_penalty_threshold_mcp)

export(cdm_penalty_threshold_ridge)

export(cdm_penalty_threshold_scad)

export(cdm_penalty_threshold_scadL2)

export(cdm_penalty_threshold_tlp)

export(cdm_penalty_values)

export(cdm_print_summary_call)

export(cdm_print_summary_computation_time)

export(cdm_print_summary_data_frame)

export(cdm_print_summary_information_criteria)

export(CDM_rbind_fill)

export(CDM_require_namespace)

export(CDM_rmvnorm)

export(csink)

export(deltaMethod)

export(din)

export(din_identifiability)

export(din.deterministic)

export(din.equivalent.class)

export(din.validate.qmatrix)

export(discrim.index)

export(entropy.lca)

export(equivalent.dina)

export(eval_likelihood)

export(gdd)

export(gdina)

export(gdina.dif)

export(gdina.wald)

export(gdm)

export(ideal.response.pattern)

export(IRT.anova)

export(IRT.classify)

export(IRT.compareModels)

export(IRT.data)

export(IRT.derivedParameters)

export(IRT.expectedCounts)

export(IRT.factor.scores)

export(IRT.frequencies)

export(IRT.IC)

export(IRT.irfprob)

export(IRT.irfprobPlot)

export(IRT.itemfit)

export(IRT.jackknife)

export(IRT.likelihood)

export(IRT.marginal_posterior)

export(IRT.modelfit)

export(IRT.parameterTable )

export(IRT.posterior)

export(IRT.predict)

export(IRT.repDesign)

export(IRT.RMSD)

export(IRT.se)

export(IRT_frequencies_default)

export(IRT_frequencies_wrapper)

export(IRT_RMSD_calc_rmsd)

export(item_by_group)

export(itemfit.rmsea)

export(itemfit.sx2)

export(mcdina)

export(modelfit.cor)

export(modelfit.cor.din)

export(modelfit.cor2)

export(numerical_gradient)

export(numerical_Hessian)

export(numerical_Hessian_partial)

export(osink)

export(personfit.appropriateness)

export(plot_item_mastery)

export(reglca)

export(sequential.items)

export(sim.din)

export(sim.gdina)

export(sim.gdina.prepare)

export(sim_model)

export(skill.cor)

export(skill.polychor)

export(skillspace.approximation)

export(skillspace.full)

export(skillspace.hierarchy)

export(slca)

export(summary_sink)

export(WaldTest)

# internal functions; not intended to be visible to users

# export(check.input, rowMaxs, rowProds2, plot.din, print.din, summary.din,

# print.summary.din)

#####################################################

######### S3 methods ################################

S3method(anova, din)

S3method(anova, gdina)

S3method(anova, gdm)

S3method(anova, mcdina)

S3method(anova, reglca)

S3method(anova, slca)

S3method(coef, din)

S3method(coef, gdina)

S3method(coef, gdm)

S3method(coef, IRT.jackknife)

S3method(coef, mcdina)

S3method(coef, slca)

S3method(confint,din)

S3method(discrim.index, din)

S3method(discrim.index, gdina)

S3method(IRT.data, din)

S3method(IRT.data, gdina)

S3method(IRT.data, gdm)

S3method(IRT.data, mcdina)

S3method(IRT.data, reglca)

S3method(IRT.data, slca)

S3method(IRT.frequencies, din)

S3method(IRT.frequencies, gdina)

S3method(IRT.frequencies, gdm)

S3method(IRT.frequencies, mcdina)

S3method(IRT.frequencies, slca)

S3method(IRT.expectedCounts, din)

S3method(IRT.expectedCounts, gdina)

S3method(IRT.expectedCounts, gdm)

S3method(IRT.expectedCounts, mcdina)

S3method(IRT.expectedCounts, reglca)

S3method(IRT.expectedCounts, slca)

S3method(IRT.factor.scores, din)

S3method(IRT.factor.scores, gdina)

S3method(IRT.factor.scores, gdm)

S3method(IRT.factor.scores, mcdina)

S3method(IRT.factor.scores, slca)

S3method(IRT.irfprob, din)

S3method(IRT.irfprob, gdina)

S3method(IRT.irfprob, gdm)

S3method(IRT.irfprob, mcdina)

S3method(IRT.irfprob, reglca)

S3method(IRT.irfprob, slca)

S3method(IRT.itemfit, din)

S3method(IRT.itemfit, gdina)

S3method(IRT.itemfit, gdm)

S3method(IRT.itemfit, reglca)

S3method(IRT.itemfit, slca)

S3method(IRT.jackknife, gdina)

S3method(IRT.likelihood, din)

S3method(IRT.likelihood, gdina)

S3method(IRT.likelihood, gdm)

S3method(IRT.likelihood, mcdina)

S3method(IRT.likelihood, reglca)

S3method(IRT.likelihood, slca)

S3method(IRT.modelfit, din)

S3method(IRT.modelfit, gdina)

S3method(IRT.marginal_posterior, din)

S3method(IRT.marginal_posterior, gdina)

S3method(IRT.marginal_posterior, mcdina)

S3method(IRT.posterior, din)

S3method(IRT.posterior, gdina)

S3method(IRT.posterior, gdm)

S3method(IRT.posterior, mcdina)

S3method(IRT.posterior, slca)

S3method(IRT.posterior, reglca)

S3method(IRT.se, din)

S3method(logLik, din)

S3method(logLik, gdina)

S3method(logLik, gdm)

S3method(logLik, mcdina)

S3method(logLik, slca)

S3method(logLik, reglca)

S3method(plot, din)

S3method(plot, gdina)

S3method(plot, gdm)

S3method(plot, itemfit.sx2)

S3method(plot, personfit.appropriateness)

S3method(plot, slca)

S3method(plot_item_mastery, din)

S3method(plot_item_mastery, gdina)

S3method(predict,din)

S3method(predict,gdina)

S3method(predict,gdm)

S3method(predict,mcdina)

S3method(predict,slca)

S3method(print, din)

S3method(print, gdina)

S3method(print, gdm)

S3method(print, mcdina)

S3method(print, slca)

S3method(print, summary.din)

S3method(summary, cdi.kli)

S3method(summary, din)

S3method(summary, din_identifiability)

S3method(summary, discrim.index)

S3method(summary, entropy.lca)

S3method(summary, gdina)

S3method(summary, gdina.dif)

S3method(summary, gdina.wald)

S3method(summary, gdm)

S3method(summary, IRT.compareModels)

S3method(summary, IRT.jackknife)

S3method(summary, IRT.RMSD)

S3method(summary, itemfit.sx2)

S3method(summary, mcdina)

S3method(summary, modelfit.cor.din)

S3method(summary, personfit.appropriateness)

S3method(summary, reglca)

S3method(summary, slca)

S3method(vcov, din)

S3method(vcov, IRT.jackknife)