WormBase Model:SAGE data

WormBase Models

Model

#SAGE_data      Result          Frequency               UNIQUE Int      //tag count
                                Total_tag_count         UNIQUE Int      //sum of all tag counts in the experiment
                                Relative_abundance      UNIQUE Float    //Frequency/Total_tag_count
                                Significance            UNIQUE Float
                                Confidence_level        UNIQUE Float
                                Standard_deviation      UNIQUE Float
                                Number_of_experiments   UNIQUE Int
                Expression_cluster ?Expression_cluster XREF SAGE_tag    //Replaces ?Cluster connection
                Sequence_quality  UNIQUE Float            //most commonly cumulative phred scores associated with the tag 
                                                // sequences; not in ?SAGE_tag since it will vary from experiment to experiment