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33 Open 14 Closed
33 Open 14 Closed
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Issues list

pvalue cutoff changes the predicted p-site, which is detected at site that is not the peak in metplot function
#65 opened Sep 11, 2024 by dougbarrows
metaplot import error Python 3.10
#64 opened Jun 23, 2024 by ericmalekos
Question on handling multimappers
#63 opened Apr 16, 2024 by mosi223
2
No obviously periodicity are detected from bam file when running metaplots step
#62 opened Mar 29, 2024 by DooYal
3
No R script supp
#61 opened Feb 29, 2024 by rabc9
Incorrect handling of hdf5 file for repeated runs of RiboCode
#59 opened Dec 4, 2023 by jdcla
RiboCode nf-core module
#58 opened Oct 20, 2023 by JackCurragh
h5py TypeError: No conversion path for dtype: dtype('<U18')
#57 opened Jul 20, 2023 by huipan1973
psites_number table is not generated with v1.2.15
#55 opened May 18, 2023 by hsinyenwu
1
ValueError: unsupported pickle protocol: 5 in metaplots
#54 opened Apr 28, 2023 by z626093820
1
ModuleNotFoundError: No module named 'fasta'
#53 opened Mar 27, 2023 by fulaibaowang
6
different transcripts of one gene
#52 opened Nov 22, 2022 by yx-xu
Question on adjusted P values reported in collapsed output
#51 opened Aug 16, 2022 by mt1022
2
remove PCR duplicate
#47 opened Jul 21, 2022 by yx-xu
2
Empty "transcripts_cds.txt" file
#46 opened Jun 8, 2022 by huguanjing
1
请问关于ORF预测结果中‘Psites_frame0_RPKM’代表什么意思？
#45 opened Jun 8, 2022 by z626093820
4
error in metaplots step
#43 opened May 27, 2022 by hugch2020
1
Whether multiple mapping affect ribocode result
#42 opened May 12, 2022 by Hilarialy
1
RiboCode_onestep crashes when calling detectORF
#41 opened May 11, 2022 by trum994
1
can't locate attribute: psites_number
#40 opened May 9, 2022 by trum994
1
ImportError: cannot import name 'PPoly' from partially initialized module 'scipy.interpolate' (most likely due to a circular import) (/home/zhai2/miniconda3/lib/python3.8/site-packages/scipy/interpolate/__init__.py)
#37 opened Mar 23, 2022 by z626093820
1
Read counts issues
#36 opened Mar 12, 2022 by tan5251
2
ValueError: Can't transform the genomic interval, please check!
#35 opened Mar 10, 2022 by z626093820
1
psite HDF5 file is saved in the wrong location
#31 opened Jan 6, 2022 by Roleren
2
Error in GTFupdate
#30 opened Nov 15, 2021 by lbwfff
1
ProTip! no:milestone will show everything without a milestone.