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Commits on Sep 19, 2024

• Update main.rs

  samhorsfield96

  authored
  996b2e4

• Update main.rs

  samhorsfield96

  authored
  07f7d26

Commits on Aug 30, 2024

• Enables selection on genome size correctly

  samhorsfield96

  committed
  200edfe

• Adds selection for genomes that are closer to avg_gene_freq

  samhorsfield96

  committed
  8984d5f

• Adds core gene number specification

  samhorsfield96

  committed
  761cafb

Commits on Jul 16, 2024

• Enables avg_gene_prop

  samhorsfield96

  committed
  bdc4e6b

Commits on Jul 15, 2024

• Turns off release debug mode

  samhorsfield96

  committed
  5e92fae

• Adds rng jumps for each sampling

  samhorsfield96

  committed
  ad643af

• Adds plotting code and example distances

  samhorsfield96

  committed
  1221dfd

• Removes repeated to_owned call to improve efficiency

  samhorsfield96

  committed
  366cdc2

• Corrects issue with array slicing and jaccard distance calculation

  samhorsfield96

  committed
  dd31423

Commits on Jul 12, 2024

• Corrects subsetting of variance vector, however will error as row slicing not working

  samhorsfield96

  committed
  a0e6197

• Corrects hamming distance equation

  samhorsfield96

  committed
  139732e

• Moves weighted_dist definition outside for loops

  samhorsfield96

  committed
  087a87b

• Updates argument printing

  samhorsfield96

  committed
  e756081

• Allows command line interface

  samhorsfield96

  committed
  1b13783

Commits on Jul 11, 2024

• Corrects file writing

  samhorsfield96

  committed
  ef06843

• Adds write file support

  samhorsfield96

  committed
  f1367dc

• Merge pull request #2 from bacpop/ndarray

  samhorsfield96

  authored
  7a1e0e6

Commits on Apr 29, 2024

• Adds parallelisation for distance measures

  samhorsfield96

  committed
  0ce161e

• Adds downsampling of pairwise distances

  samhorsfield96

  committed
  e97b107

• Increases speed by removing comparisons between equal columns

  samhorsfield96

  committed
  2c1cd0b

• Adds ndarray parralelisation

  samhorsfield96

  committed
  be976bc

• Adds ndarray support

  samhorsfield96

  committed
  6e962fe

Commits on Apr 26, 2024

• Adds vectorised hamming distance function

  samhorsfield96

  committed
  725e227

• Address issue where no. mutations set to zero

  samhorsfield96

  committed
  48f98a3

• Adds distance calculation and updates random number generator

  samhorsfield96

  committed
  19a38f7

• Merge pull request #1 from bacpop/jlees

  samhorsfield96

  authored
  1106478

• Fix one RNG problem

  johnlees

  committed
  ca559e6

Commits on Mar 27, 2024

• Adds multithreading

  samhorsfield96

  committed
  5270eda

• Corrects compiler issues

  samhorsfield96

  committed
  0b33952

Commits on Mar 26, 2024

• Corrects build time errors

  samhorsfield96

  committed
  a734585

• Initialises pansim project

  samhorsfield96

  committed
  b9edf60

• Initial commit

  samhorsfield96

  authored
  2df2883