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Commits on Oct 17, 2025

• Merge pull request #21 from dpeerlab/bugfix/stability

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• Install scanpy

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• More stable metric derivation

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• Merge pull request #20 from dpeerlab/feature/reporting

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Commits on Oct 15, 2025

• Import readability of report

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• Version push of hto-dnd

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Commits on Oct 1, 2025

• Complete rework. Deprecate notebooks.

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• Merge local

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• Major refactor of basic-qc

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Commits on Sep 29, 2025

• Merge pull request #19 from dpeerlab/new/docker-hto-dnd

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• Add hto-dnd docker

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• Version bump cellranger

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Commits on Jun 9, 2025

• Merge pull request #18 from dpeerlab/update/cite-seq-count-1.4.4

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• Update QC notebooks to support updated HTO pipelines

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Commits on May 6, 2025

• Support later python versions in notebooks

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Commits on Apr 21, 2025

• Merge pull request #17 from dpeerlab/update/cite-seq-count-1.4.4

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• Upgrade lightweight citeseq 1.4.4 version

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• Merge pull request #16 from dpeerlab/feature/cellranger-9-support

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• Update QC report

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• Update, simplify and debug barcode translation

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• Update readme

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• Clean up scripts

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Commits on Mar 18, 2025

• Refactor barcodes. Bugfix '-1' correction from 10x

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Commits on Mar 17, 2025

• Update scripts

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Commits on Dec 15, 2024

• Merge pull request #15 from dpeerlab/feature/cellranger-9-support

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• Add support for cellranger container

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• Merge pull request #13 from dpeerlab/refactor/fix-hto-adt

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• Merge branch 'main' of https://github.com/dpeerlab/sharp into feature/add-10x-barcode-1

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• Merge pull request #12 from dpeerlab/feature/notebook-dsb-demux

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• Merge branch 'main' of https://github.com/dpeerlab/sharp into feature/add-10x-barcode-1

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• Refactor and debug code

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Commits on Sep 30, 2024

• Clean up

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• Add tests

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• Update tests

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• Update QC notebooks

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