CPython, the most commonly used implementation of Python, is slow for CPU bound tasks. PyPy is fast.
Using a slightly modified version of David Beazleys CPU bound test code (added loop for multiple tests), you can see the difference between CPython and PyPy's processing.
# PyPy
$ ./pypy -V
Python 2.7.1 (7773f8fc4223, Nov 18 2011, 18:47:10)
[PyPy 1.7.0 with GCC 4.4.3]
$ ./pypy measure2.py
0.0683999061584
0.0483210086823
0.0388588905334
0.0440690517426
0.0695300102234# CPython
$ ./python -V
Python 2.7.1
$ ./python measure2.py
1.06774401665
1.45412397385
1.51485204697
1.54693889618
1.60109114647The GIL (Global Interpreter Lock) is how Python allows multiple threads to operate at the same time. Python's memory management isn't entirely thread-safe, so the GIL is required to prevent multiple threads from running the same Python code at once.
David Beazley has a great guide on how the GIL operates. He also covers the new GIL in Python 3.2. His results show that maximizing performance in a Python application requires a strong understanding of the GIL, how it affects your specific application, how many cores you have, and where your application bottlenecks are.
Special care must be taken when writing C extensions to make sure you register your threads with the interpreter.
Cython implements a superset of the Python language with which you are able to write C and C++ modules for Python. Cython also allows you to call functions from compiled C libraries. Using Cython allows you to take advantage of Python's strong typing of variables and operations.
Here's an example of strong typing with Cython:
def primes(int kmax):
"""Calculation of prime numbers with additional
Cython keywords"""
cdef int n, k, i
cdef int p[1000]
result = []
if kmax > 1000:
kmax = 1000
k = 0
n = 2
while k < kmax:
i = 0
while i < k and n % p[i] != 0:
i = i + 1
if i == k:
p[k] = n
k = k + 1
result.append(n)
n = n + 1
return resultThis implementation of an algorithm to find prime numbers has some additional keywords instead of the next one, which is implemented in pure Python:
def primes(kmax):
"""Calculation of prime numbers in standard Python syntax"""
p= range(1000)
result = []
if kmax > 1000:
kmax = 1000
k = 0
n = 2
while k < kmax:
i = 0
while i < k and n % p[i] != 0:
i = i + 1
if i == k:
p[k] = n
k = k + 1
result.append(n)
n = n + 1
return resultNotice that in the Cython version you declare integers and integer arrays for to be compiled into C types while also creating a Python list:
def primes(int kmax):
"""Calculation of prime numbers with additional
Cython keywords"""
cdef int n, k, i
cdef int p[1000]
result = []def primes(kmax):
"""Calculation of prime numbers in standard Python syntax"""
p= range(1000)
result = []What is the difference? In the upper Cython version you can see the declaration of the variable types and the integer array in a similar way like in standard C. For example cdef int n,k,i in line 3. This additional type declaration (e.g. integer) allows the Cython compiler to generate more efficient C code from the second code. While standard Python code is saved in :file:`*.py` files, Cython code is saved in :file:`*.pyx` files.
And what is with the speed? So let's try it!
import time
#activate pyx compiler
import pyximport
pyximport.install()
#primes implemented with Cython
import primesCy
#primes implemented with Python
import primes
print "Cython:"
t1= time.time()
print primesCy.primes(500)
t2= time.time()
print "Cython time: %s" %(t2-t1)
print ""
print "Python"
t1= time.time()
print primes.primes(500)
t2= time.time()
print "Python time: %s" %(t2-t1)These both lines need a remark:
import pyximport
pyximport.install()The pyximport module allows you to import :file:`*.pyx` files (e.g., :file:`primesCy.pyx`) with the Cython-compiled version of the primes function. The pyximport.install() command allows the Python interpreter to start the Cython compiler directly to generate C-code, which is automatically compiled to a :file:`*.so` C-library. Cython is able to import this library for you in your Python-code. Very easy and very efficient. With the time.time() function you are able to compare the time between this 2 different calls to find 500 prime numbers. On a standard notebook (dual core AMD E-450 1.6 GHz), the measured values are:
Cython time: 0.0054 seconds
Python time: 0.0566 secondsAnd here the output of an embedded ARM beaglebone machine: .. code-block:: console
Cython time: 0.0196 seconds
Python time: 0.3302 seconds
.. todo:: Write about Numba and the autojit compiler for NumPy