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    11 repositories

    • Urban-RNA-Virome

      Public
      R
      •2•0•0•0•Updated Dec 12, 2025Dec 12, 2025

    • CAP2

      Public
      Python
      •
      MIT License
      •6•12•8•2•Updated Oct 3, 2023Oct 3, 2023

    • metasub_utils

      Public
      Python
      •
      MIT License
      •1•8•2•1•Updated Dec 26, 2022Dec 26, 2022

    • main_paper_figures

      Public
      Code used to generate figures for the MetaSUB Main Paper Released August 2019
      Jupyter Notebook
      •2•4•2•0•Updated Oct 5, 2021Oct 5, 2021

    • MetaSUB_CAP

      Public
      A comprehensive pipeline for short read metagenomic data
      bioinformaticspipelinemetagenomics
      bioinformaticspipelinemetagenomicsbioinformatics-pipelinemicrobiome
      Python
      •
      MIT License
      •10•25•7•1•Updated Aug 25, 2020Aug 25, 2020

    • MetaSUB-metadata

      Public
      Python
      •3•5•0•0•Updated Feb 22, 2020Feb 22, 2020

    • bioinformatics_management

      Public
      1•2•1•0•Updated Aug 26, 2019Aug 26, 2019

    • MetaSUB_assembly_CAP

      Public
      Python
      •
      MIT License
      •0•1•1•0•Updated May 27, 2019May 27, 2019

    • MetaSUB_QC_Pipeline

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Jan 17, 2019Jan 17, 2019

    • metasub-scripts

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 10, 2018Apr 10, 2018

    • kobo-metadata-cleanup

      Public
      Cleanup of the metadata collected with KoboToolBox during gCSD2017
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 2, 2017Nov 2, 2017
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