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lamanno-epfl

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  1. velocycle velocycle Public

    Bayesian model for RNA velocity estimation of periodic manifolds

    Jupyter Notebook 34 2

  2. uMAIA uMAIA Public

    Toolbox for the processing and analysis of MALDI-MSI data

    Jupyter Notebook 12

  3. tomographer tomographer Public

    The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following article: https://www.nature.com/articles/s41587-021-00879-7

    Jupyter Notebook 11 3

  4. rpe_differentiation_profiling_code rpe_differentiation_profiling_code Public

    Custom code to accompany methods of hESC-RPE differentiation study

    HTML 4 1

  5. rgl3_signaling_dopaminergic_analysis rgl3_signaling_dopaminergic_analysis Public

    Code for the CellChat and LIANA signalling analysis of the developing dopaminergic niche accompanying the paper "Midbrain Dopaminergic Neuron Development is Regulated by Two Molecularly Distinct Su…

    Jupyter Notebook 2

  6. EUCLID EUCLID Public

    Spatial lipidomics analysis package, Empowering uMAIA to Cluster for Lipizones, Imputation, and Differential analysis

    Python 2 2

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