Bug fixes

foisys · foisys · commit 59113606743e · 2011-02-21T01:31:00.000Z
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8792 7c6358e6-4a41-0410-a743-a5b2a554c398
diff --git a/biojava3-ws/src/main/java/org/biojava3/ws/alignment/qblast/NCBIQBlastAlignmentProperties.java b/biojava3-ws/src/main/java/org/biojava3/ws/alignment/qblast/NCBIQBlastAlignmentProperties.java
@@ -47,7 +47,7 @@ public class NCBIQBlastAlignmentProperties implements
 	private HashMap<String, String> param = new HashMap<String, String>();
 
 	
-	public void NCBIQBlastAlignmentProperties() {
+	public NCBIQBlastAlignmentProperties() {
 		this.param.put("PROGRAM","not_set");
 		this.param.put("DATABASE","not_set");
 		this.param.put("OTHER_ADVANCED","not_set");
diff --git a/biojava3-ws/src/main/java/org/biojava3/ws/alignment/qblast/NCBIQBlastService.java b/biojava3-ws/src/main/java/org/biojava3/ws/alignment/qblast/NCBIQBlastService.java
@@ -153,7 +153,7 @@ private String sendActualAlignementRequest(String str,
 		 * checking in RemoteQBlastAlignmentProperties 
 		 *
 		 * */
-		if (rpa.getAlignmentOption("OTHER_ADVANCED") != "not_set") {
+		if (rpa.getAlignmentOption("OTHER_ADVANCED")!="not_set") {
 			cmd += cmd + "&" + rpa.getAlignmentOption("OTHER_ADVANCED");
 		}
 

Original file line number	Diff line number	Diff line change
`@@ -153,7 +153,7 @@ private String sendActualAlignementRequest(String str,`
`153`	`153`	`* checking in RemoteQBlastAlignmentProperties`
`154`	`154`	`*`
`155`	`155`	`* */`
`156`		`- if (rpa.getAlignmentOption("OTHER_ADVANCED") != "not_set") {`
	`156`	`+ if (rpa.getAlignmentOption("OTHER_ADVANCED")!="not_set") {`
`157`	`157`	`cmd += cmd + "&" + rpa.getAlignmentOption("OTHER_ADVANCED");`
`158`	`158`	`}`
`159`	`159`