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# Copyright (c) 2015-present, Facebook, Inc.
# All rights reserved.
#
# This source code is licensed under the BSD+Patents license found in the
# LICENSE file in the root directory of this source tree.
from __future__ import absolute_import, division, print_function
import numpy as np
import unittest
import faiss
def make_binary_dataset(d, nb, nt, nq):
assert d % 8 == 0
rs = np.random.RandomState(123)
x = rs.randint(256, size=(nb + nq + nt, int(d / 8))).astype('uint8')
return x[:nt], x[nt:-nq], x[-nq:]
def binary_to_float(x):
n, d = x.shape
x8 = x.reshape(n * d, -1)
c8 = 2 * ((x8 >> np.arange(8)) & 1).astype('int8') - 1
return c8.astype('float32').reshape(n, d * 8)
class TestIndexBinaryFromFloat(unittest.TestCase):
"""Use a binary index backed by a float index"""
def test_index_from_float(self):
d = 256
nt = 0
nb = 1500
nq = 500
(xt, xb, xq) = make_binary_dataset(d, nb, nt, nq)
index_ref = faiss.IndexFlatL2(d)
index_ref.add(binary_to_float(xb))
index = faiss.IndexFlatL2(d)
index_bin = faiss.IndexBinaryFromFloat(index)
index_bin.add(xb)
D_ref, I_ref = index_ref.search(binary_to_float(xq), 10)
D, I = index_bin.search(xq, 10)
np.testing.assert_allclose((D_ref / 4.0).astype('int32'), D)
def test_wrapped_quantizer(self):
d = 256
nt = 150
nb = 1500
nq = 500
(xt, xb, xq) = make_binary_dataset(d, nb, nt, nq)
nlist = 16
quantizer_ref = faiss.IndexBinaryFlat(d)
index_ref = faiss.IndexBinaryIVF(quantizer_ref, d, nlist)
index_ref.train(xt)
index_ref.add(xb)
unwrapped_quantizer = faiss.IndexFlatL2(d)
quantizer = faiss.IndexBinaryFromFloat(unwrapped_quantizer)
index = faiss.IndexBinaryIVF(quantizer, d, nlist)
index.train(xt)
index.add(xb)
D_ref, I_ref = index_ref.search(xq, 10)
D, I = index.search(xq, 10)
np.testing.assert_array_equal(D_ref, D)
def test_wrapped_quantizer_IMI(self):
d = 256
nt = 3500
nb = 10000
nq = 500
(xt, xb, xq) = make_binary_dataset(d, nb, nt, nq)
index_ref = faiss.IndexBinaryFlat(d)
index_ref.add(xb)
nlist_exp = 6
nlist = 2 ** (2 * nlist_exp)
float_quantizer = faiss.MultiIndexQuantizer(d, 2, nlist_exp)
wrapped_quantizer = faiss.IndexBinaryFromFloat(float_quantizer)
wrapped_quantizer.train(xt)
assert nlist == float_quantizer.ntotal
index = faiss.IndexBinaryIVF(wrapped_quantizer, d,
float_quantizer.ntotal)
index.nprobe = 2048
assert index.is_trained
index.add(xb)
D_ref, I_ref = index_ref.search(xq, 10)
D, I = index.search(xq, 10)
recall = sum(gti[0] in Di[:10] for gti, Di in zip(D_ref, D)) \
/ float(D_ref.shape[0])
assert recall > 0.82, "recall = %g" % recall
def test_wrapped_quantizer_HNSW(self):
faiss.omp_set_num_threads(1)
def bin2float(v):
def byte2float(byte):
return np.array([-1.0 + 2.0 * (byte & (1 << b) != 0)
for b in range(0, 8)])
return np.hstack([byte2float(byte) for byte in v]).astype('float32')
def floatvec2nparray(v):
return np.array([np.float32(v.at(i)) for i in range(0, v.size())]) \
.reshape(-1, d)
d = 256
nt = 12800
nb = 10000
nq = 500
(xt, xb, xq) = make_binary_dataset(d, nb, nt, nq)
index_ref = faiss.IndexBinaryFlat(d)
index_ref.add(xb)
nlist = 256
clus = faiss.Clustering(d, nlist)
clus_index = faiss.IndexFlatL2(d)
xt_f = np.array([bin2float(v) for v in xt])
clus.train(xt_f, clus_index)
centroids = floatvec2nparray(clus.centroids)
hnsw_quantizer = faiss.IndexHNSWFlat(d, 32)
hnsw_quantizer.add(centroids)
hnsw_quantizer.is_trained = True
wrapped_quantizer = faiss.IndexBinaryFromFloat(hnsw_quantizer)
assert nlist == hnsw_quantizer.ntotal
assert nlist == wrapped_quantizer.ntotal
assert wrapped_quantizer.is_trained
index = faiss.IndexBinaryIVF(wrapped_quantizer, d,
hnsw_quantizer.ntotal)
index.nprobe = 128
assert index.is_trained
index.add(xb)
D_ref, I_ref = index_ref.search(xq, 10)
D, I = index.search(xq, 10)
recall = sum(gti[0] in Di[:10] for gti, Di in zip(D_ref, D)) \
/ float(D_ref.shape[0])
assert recall > 0.77, "recall = %g" % recall
class TestOverrideKmeansQuantizer(unittest.TestCase):
def test_override(self):
d = 256
nt = 3500
nb = 10000
nq = 500
(xt, xb, xq) = make_binary_dataset(d, nb, nt, nq)
def train_and_get_centroids(override_kmeans_index):
index = faiss.index_binary_factory(d, "BIVF10")
index.verbose = True
if override_kmeans_index is not None:
index.clustering_index = override_kmeans_index
index.train(xt)
centroids = faiss.downcast_IndexBinary(index.quantizer).xb
return faiss.vector_to_array(centroids).reshape(-1, d // 8)
centroids_ref = train_and_get_centroids(None)
# should do the exact same thing
centroids_new = train_and_get_centroids(faiss.IndexFlatL2(d))
assert np.all(centroids_ref == centroids_new)
# will do less accurate assignment... Sanity check that the
# index is indeed used by kmeans
centroids_new = train_and_get_centroids(faiss.IndexLSH(d, 16))
assert not np.all(centroids_ref == centroids_new)