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added a line on the usage analysis
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_wikis/BioJava3_Proposal.md

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@@ -31,6 +31,11 @@ Reasoning
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Proposal
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- Analyse how BioJava is being used by the community. See the
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[UsageAnalysis](UsageAnalysis "wikilink") page.
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- To start from scratch, creating a number of smaller jars as
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sub-projects within an umbrella BioJava3 project. Each jar would
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provide tools for a specific purpose. Additional jars would provide

_wikis/BioJava3_Proposal.mediawiki

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@@ -14,8 +14,11 @@ It is suggested that development stop on the existing BioJava/BioJavaX/BioJava2
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* The only database support is for BioSQL, which uses Hibernate but not in a fully flexible manner (i.e. cannot connect to more than one db at a time).
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* It is sequence-focused. Users have moved on.
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==Proposal==
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* Analyse how BioJava is being used by the community. See the [[UsageAnalysis]] page.
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* To start from scratch, creating a number of smaller jars as sub-projects within an umbrella BioJava3 project. Each jar would provide tools for a specific purpose. Additional jars would provide cross-purpose tools such as format converters or text-to-object interfaces.
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* Although starting from scratch, much existing code could be reused or refactored to suit the new design.

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