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Adding prominent Github links
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_wikis/BioJava3_Feature_Requests.md

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title: BioJava3 Feature Requests
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The following features are missing from the current BioJava3.
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Feature requests and bug reports should be added as [Github
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issues](https://github.com/biojava/biojava/issues/). We welcome all
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feature requests, both large and small.
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If you are looking for a programming project and are interested in
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contributing any of these please contact the biojava-dev mailing list,
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or browse open feature requests on
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[Github](https://github.com/biojava/biojava/issues/).
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Some example feature requests:
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- Balibase
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- Balibase [[\#119](https://github.com/biojava/biojava/issues/119)]
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- UniProt (XML/txt)
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- port the BioJava 1 Chromatogram parser to BioJava 3
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[[\#120](https://github.com/biojava/biojava/issues/120)]
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- Variation APIs that bring together Ensembl Variation, VCF file
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format, GFF3+GVF file format, samtools, Picard, GATK, etc.
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- SCOP2 parser (See [Github
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issue](https://github.com/biojava/biojava/issues/82))
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[[\#121](https://github.com/biojava/biojava/issues/121)]
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- SCOP2 parser [[\#82](https://github.com/biojava/biojava/issues/82)]
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There are also a number of algorithms where we would be interested in
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[Java ports](Algorithm_Java_port "wikilink").

_wikis/BioJava3_Feature_Requests.mediawiki

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The following features are missing from the current BioJava3.
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Feature requests and bug reports should be added as [https://github.com/biojava/biojava/issues/ Github issues]. We welcome all feature requests, both large and small.
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If you are looking for a programming project and are interested in contributing any of these please contact the biojava-dev mailing list, or browse open feature requests on [https://github.com/biojava/biojava/issues/ Github].
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{{Github Issues}}
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* Balibase
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Some example feature requests:
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* Balibase [https://github.com/biojava/biojava/issues/119 [#119]]
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* UniProt (XML/txt)
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* port the BioJava 1 Chromatogram parser to BioJava 3
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* Variation APIs that bring together Ensembl Variation, VCF file format, GFF3+GVF file format, samtools, Picard, GATK, etc.
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* SCOP2 parser (See [https://github.com/biojava/biojava/issues/82 Github issue])
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* port the BioJava 1 Chromatogram parser to BioJava 3 [https://github.com/biojava/biojava/issues/120 [#120]]
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* Variation APIs that bring together Ensembl Variation, VCF file format, GFF3+GVF file format, samtools, Picard, GATK, etc. [https://github.com/biojava/biojava/issues/121 [#121]]
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* SCOP2 parser [https://github.com/biojava/biojava/issues/82 [#82]]
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There are also a number of algorithms where we would be interested in [[Algorithm_Java_port|Java ports]].
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