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Commits on Aug 7, 2017

• Merge branch 'master' of github.com:biojava/biojava into mmtf

  lafita

  committed
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Commits on Aug 3, 2017

• Merge branch 'master' of github.com:biojava/biojava into serialize

  lafita

  committed
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Commits on Aug 2, 2017

• Fixing test after PDB v5 remediation

  josemduarte

  committed
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Commits on Jul 28, 2017

• Add a more complete check to structure serialization test

  lafita

  committed
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• Make the secondary structure objects serializable

  lafita

  committed
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Commits on Jul 13, 2017

• Fixing tests after PDB v5 remediation

  josemduarte

  committed
  d0d8d86

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• Fixing test after case change in RCSB rest service

  josemduarte

  committed
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Commits on Jul 6, 2017

• Uncomment release Date lines and test

  lafita

  committed
  7f1a416

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• Fix path bug in mmtf test

  lafita

  committed
  c6dddfd

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• Merge branch 'master' into master

  lafita

  authored
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• Merge pull request #680 from lafita/mmcif5

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  lafita

  authored
  dbdc477

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• Implemented reading of mmCIF 5.0 changes in the _pdbx_database_status

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  pwrose

  committed
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Commits on Jun 30, 2017

• Step towards supporting MMCIF version 5

  lafita

  committed
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• Test parsing the release date from MMCIF

  lafita

  committed
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• Parse the release date from MMCIF files

  lafita

  committed
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• Test parsing dates from PDB format

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  lafita

  committed
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Commits on Jun 29, 2017

• Organize the MMTF tests

  lafita

  committed
  ae19c8c

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• Test Structure serialization

  lafita

  committed
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Commits on Jun 21, 2017

• Fix for large coordinates to avoid ',' grouping character in coordinates.

  

  Matt Larson

  committed
  06a2076

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Commits on Jun 16, 2017

• Dssp url fix and update to latest mmtf-java

  josemduarte

  committed
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• Now doing dssp tests from local resources

  josemduarte

  committed
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Commits on Apr 26, 2017

• Changing all line ending to unix (to match .gitattributes)

  sbliven

  committed
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Commits on Apr 5, 2017

• moving SIFTS unit test to parse local file, since file from remote location has changed (and seems to contain inconsistent data)

  andreasprlic

  committed
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Commits on Mar 29, 2017

• more precise comparison of parsing speed between mtf and pdb file formats

  andreasprlic

  committed
  a216f92

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• Merge pull request #4 from andreasprlic/mmtf105

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  josemduarte

  authored
  2e3b35f

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• cleanup

  andreasprlic

  committed
  80a4e0c

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• new unit test that compares a slightly larger structure.

  andreasprlic

  committed
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• new version of test now only compares parsing in RAM

  andreasprlic

  committed
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• Updating test after file was remediated

  josemduarte

  committed
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• adding a parsing performance unit test for mmtf, that compares with pdb format parsing.

  andreasprlic

  committed
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Commits on Mar 22, 2017

• TestBond is updated to match the updated data in structure file used for test

  

  Yana Valasatava

  committed
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Commits on Jan 12, 2017

• The fix to the insertion code issue to is use the ResidueNumber object as the hash key instead of a string made from the residue number. Fixes bug where structures with insertion codes were likely…

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  Matt Larson

  committed
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Commits on Dec 22, 2016

• Issue 330: fixes for PDB Parser,

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  Matt Larson

  committed
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Commits on Nov 23, 2016

• Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.

  josemduarte

  committed
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Commits on Nov 22, 2016

• Implementing new crystallographic metadata fields.

  josemduarte

  committed
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