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Commits on Nov 11, 2020

• Removing a test that now fails due to a deprecation in RCSB PDB

  josemduarte

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Commits on Nov 3, 2020

• Removing DSSPParser.fetch after RCSB deprecation

  josemduarte

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Commits on Aug 12, 2020

• remove redundant test

  sbittrich

  committed
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• adapt TestMMCIFWriting for ciftools-based impl

  sbittrich

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Commits on Aug 11, 2020

• Merge remote-tracking branch 'upstream/master' into bcif

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Commits on Aug 8, 2020

• Fixed test broken after carbohydrate remediation

  josemduarte

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Commits on Jul 24, 2020

• Removing rcsb validation reports parsing code and tests

  josemduarte

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• Removing test files related to removed tests

  josemduarte

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• Removing tests for rcsb legacy api code

  josemduarte

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Commits on Jul 23, 2020

• Better way of specifying hard-coded domains

  josemduarte

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• Replacing scop id by hard-coded range in test

  josemduarte

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Commits on Jul 22, 2020

• Avoid another external dependency in test

  josemduarte

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Commits on Jul 7, 2020

• rewire ciftools-java

  sbittrich

  committed
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Commits on Jul 5, 2020

• Bugfix: ScopFactory wasn't working after last commit

  josemduarte

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Commits on Jul 4, 2020

• Fixing test, fixing docs, bumping SNAPSHOT

  josemduarte

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• Removing JFatCatClient and dependencies

  josemduarte

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Commits on Jul 3, 2020

• Clean up

  josemduarte

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Commits on Apr 18, 2020

• Merge pull request #868 from josemduarte/mmcif-branched-polymers

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Commits on Apr 13, 2020

• Now considering branched entities as non-polymeric. Ends up in a more consistent state. Can be mmtf-encoded.

  josemduarte

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• Now biojava can parse mmcif files with carbohydrates, though it ignores the carbohydrate chains

  josemduarte

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Commits on Jan 25, 2020

• Merge branch 'master' into interface-finder

  josemduarte

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• Cleanup

  josemduarte

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• Merge pull request #859 from josemduarte/optimise-sym-mates-clusterer

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• Initial implementation and tests

  josemduarte

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Commits on Jan 21, 2020

• Now testing for subunit clustering with entity ids

  josemduarte

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• Right order of params

  josemduarte

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• New test

  josemduarte

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Commits on Jan 20, 2020

• Extracting method in test

  josemduarte

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Commits on Jan 12, 2020

• Merge pull request #857 from josemduarte/optimise-sym-mates-clusterer

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Commits on Dec 27, 2019

• Extracting duplicate code to a method. Some cleanups

  josemduarte

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Commits on Nov 13, 2019

• Covering another alt loc bond edge case

  josemduarte

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Commits on Nov 12, 2019

• Now all tests pass

  josemduarte

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Commits on Nov 10, 2019

• Extending test

  josemduarte

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• Fixing issue: no bonds between different altloc atoms

  josemduarte

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Commits on Sep 3, 2019

• Fixing test and clean up

  josemduarte

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