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Commits on Jul 8, 2017

• Last travis-CI build got cancelled. Re-push to trigger it again.

  arojnuckarin

  committed
  76e2499

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• Revert to old behavior where process(int) return null on end-of-file.

  arojnuckarin

  committed
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• Attempt to fix issue #659 - Error parsing FASTA in multiple passes

  arojnuckarin

  committed
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Commits on Jun 7, 2017

• 1. Added a new folder into main/java/org/biojava/nbio/core/sequence package

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  jimty0511

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Commits on Jun 2, 2017

• Added List<String> of comments with getter and setter into AbstractSequence.java;

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  jimty0511

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Commits on May 31, 2017

• Removed unused import.

  psoares

  committed
  5e4eb1d

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• Fix for #663 and some code cleanup.

  psoares

  committed
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Commits on Apr 26, 2017

• Changing all line ending to unix (to match .gitattributes)

  sbliven

  committed
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Commits on Mar 28, 2017

• adding a sequence.equals(Sequence) and hashCode class to sequences.

  valasatava

  committed
  3dadec1

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Commits on Nov 9, 2016

• Fix #596. Remove test for GenBank identifier parsing

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  sbliven

  committed
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Commits on Aug 18, 2016

• making output less verbose

  andreasprlic

  committed
  56e81e6

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• setting default log level to warn

  andreasprlic

  committed
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• making output less verbose

  andreasprlic

  committed
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Commits on Aug 16, 2016

• updating to latest version of Cobertura tests. Now can successfully run locally.

  andreasprlic

  committed
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Commits on Jul 1, 2016

• Merge branch 'master' of github.com:biojava/biojava

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  andreasprlic

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Commits on Jun 30, 2016

• #505 switching to https for all NCBI utils traffic.

  andreasprlic

  committed
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Commits on Jun 27, 2016

• Normalize percentage of identity by the length without gaps #521

  lafita

  committed
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Commits on Jun 24, 2016

• Implement tests for new utility methods in sequence objects #491

  lafita

  committed
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Commits on Mar 9, 2016

• Removing unnecessary casts

  sbliven

  committed
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• Removing unused imports

  sbliven

  committed
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• Converting initial spaces to tabs.

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  sbliven

  committed
  2417c23

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• Removing template messages

  sbliven

  committed
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• Remove trailing whitespace globally from .java files

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  sbliven

  committed
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• Running addlicense.sh

  sbliven

  committed
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Commits on Jan 26, 2016

• Merge branch 'master' of github.com:biojava/biojava

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  andreasprlic

  committed
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Commits on Jan 25, 2016

• getting Junit test to work on installations that have empty spaces in directory names

  andreasprlic

  committed
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Commits on Jan 11, 2016

• Merge branch 'pr/38'

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  emckee2006

  committed
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• Change AbstractFeature Qualifiers to a key:Array from key:value #302

  emckee2006

  committed
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Commits on Dec 5, 2015

• test case for #344

  andreasprlic

  committed
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Commits on Dec 3, 2015

• Fixing some minor warnings

  sbliven

  committed
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Commits on Dec 1, 2015

• Adding biojava license statements

  sbliven

  committed
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Commits on Nov 12, 2015

• Fixing broken path

  josemduarte

  committed
  4045e7a

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• Merge commit '248cc08c7fbbdc02249bcac0f10481127b7d3ac7'

  josemduarte

  committed
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Commits on Nov 1, 2015

• Increased type checking.

  paolopavan

  committed
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Commits on Oct 9, 2015

• Refactoring proposed by Jose Manuel Duarte to separate this module from the old implementation in org.biojava.nbio.genome.query.BlastXMLQuery.

  paolopavan

  committed
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