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onbiojava-6.1.0

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Commits on Oct 18, 2022

• removed unused import

  

  jamesmorris

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  jamesmorris

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  7f116c9

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• Changes to improve the testGithub942 test

  

  jamesmorris

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  jamesmorris

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Commits on Oct 12, 2022

• updated test data and tests

  

  jamesmorris

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  jamesmorris

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  72347b0

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• updated the test data and tests

  

  jamesmorris

  authored and

  jamesmorris

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  1443478

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• Updated test file

  

  jamesmorris

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  jamesmorris

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• Changed the file used for testing to one whith a much smaller sequence

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  jamesmorris

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  jamesmorris

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• added file to test for handling features containing joins

  

  jamesmorris

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  jamesmorris

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Commits on Oct 3, 2022

• Removed getLocusName()

  

  jamesmorris

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  jamesmorris

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Commits on Jul 6, 2022

• Added test for issue #886

  

  jamesmorris

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Commits on Jan 5, 2022

• Merge pull request #998 from richarda23/#944-testcoverage

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  josemduarte

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Commits on Jan 3, 2022

• fixes #1008

  

  otter606

  authored and

  heuermh

  committed
  9e44b24

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• test MSA

  otter606

  committed
  3c045a7

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• remove duplicate generics

  otter606

  committed
  4b33b8f

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• tidy up RNASeqTest

  otter606

  committed
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• simplify generics in RNASequence

  otter606

  committed
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Commits on Jan 2, 2022

• Strand unit test, taxonomyID unit test

  otter606

  committed
  91f4e4c

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• Strand unit test

  otter606

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  76c3bd4

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• fix deprecated assertions

  otter606

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Commits on Dec 2, 2021

• Changing new line delimiters to \\R

  aalhossary

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Commits on Nov 27, 2021

• Correct EOL RegEx for both Windows and Linux

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  aalhossary

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Commits on Nov 26, 2021

• fix mutable collections in GeneSequence

  otter606

  committed
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Commits on Nov 25, 2021

• add accessionID as a constructor argument

  otter606

  committed
  0e2e841

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• initialise sequrnce storage, throwing IAE

  otter606

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Commits on Nov 21, 2021

• tests for transcript sequence

  otter606

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Commits on Nov 19, 2021

• test that breaks encapsulation of collections

  otter606

  committed
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Commits on Nov 18, 2021

• testing exon/intron addition

  otter606

  committed
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• docs/formatting; GeneSequenceTest

  otter606

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Commits on Nov 17, 2021

• unit tests for chromosome sequence

  otter606

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Commits on Nov 16, 2021

• add license to new files

  otter606

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  28c07c6

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• convert old main method for insdbcparser to junit

  otter606

  committed
  794de2c

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• formatting/ self review

  otter606

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Commits on Nov 15, 2021

• move ProteinSequence main to junit

  otter606

  committed
  43a533a

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• move CasePreservingProteinSequenceCreator main to junit

  otter606

  committed
  c3700d5

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• replace FastaGeneWriter main with unit test

  otter606

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• remove GenericFastaHeaderParser main- duplicate of unit test

  otter606

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