Commits

Breadcrumbs

History for

onbiojava-6.1.0

User selector

All users

All time

Commit History

Commits on Oct 19, 2022

• Changed comments to javadoc

  

  jamesmorris

  authored and

  jamesmorris

  committed
  95f5d20

  Copy full SHA for 95f5d20

• changed to use primitive boolean rather than the wrapper class

  

  jamesmorris

  authored and

  jamesmorris

  committed
  61b1412

  Copy full SHA for 61b1412

Commits on Oct 18, 2022

• formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  1df1734

  Copy full SHA for 1df1734

• formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  6365b6b

  Copy full SHA for 6365b6b

• formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  199a50e

  Copy full SHA for 199a50e

• formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  0737dfe

  Copy full SHA for 0737dfe

• more formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  54640b7

  Copy full SHA for 54640b7

• More formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  f3212e3

  Copy full SHA for f3212e3

• reversing formatting changes made during development

  

  jamesmorris

  authored and

  jamesmorris

  committed
  2dac5d9

  Copy full SHA for 2dac5d9

• fixed formatting change

  

  jamesmorris

  authored and

  jamesmorris

  committed
  339ef92

  Copy full SHA for 339ef92

• added back empty line that was removed

  

  jamesmorris

  authored and

  jamesmorris

  committed
  63b5d85

  Copy full SHA for 63b5d85

• more fixes to formatting

  

  jamesmorris

  authored and

  jamesmorris

  committed
  14def30

  Copy full SHA for 14def30

• undone formatting changes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  d872145

  Copy full SHA for d872145

• When writing out feature qualifiers if they are db_xref values handle

  Show description for 4dcfbed
  

  jamesmorris

  authored and

  jamesmorris

  committed
  4dcfbed

  Copy full SHA for 4dcfbed

• Set if a db_xref qualifier requires quotes

  

  jamesmorris

  authored and

  jamesmorris

  committed
  df591fd

  Copy full SHA for df591fd

• Changed the 'name' set by the super() call to the Qualifier constructor

  Show description for fc978f7
  

  jamesmorris

  authored and

  jamesmorris

  committed
  fc978f7

  Copy full SHA for fc978f7

Commits on Oct 12, 2022

• maintain quotes around feature qualifiers if they are present

  

  jamesmorris

  authored and

  jamesmorris

  committed
  f27305e

  Copy full SHA for f27305e

• Handle partial locations in typical cases

  

  jamesmorris

  authored and

  jamesmorris

  committed
  21ec595

  Copy full SHA for 21ec595

Commits on Oct 3, 2022

• updated the source of the accession to GENBANK

  

  jamesmorris

  authored and

  jamesmorris

  committed
  a4d7729

  Copy full SHA for a4d7729

• Removed getLocusName()

  

  jamesmorris

  authored and

  jamesmorris

  committed
  ab221dc

  Copy full SHA for ab221dc

• Changes to fix a number of issues we have seen including empty locus

  Show description for 843c117
  

  jamesmorris

  authored and

  jamesmorris

  committed
  843c117

  Copy full SHA for 843c117

Commits on Jul 11, 2022

• Merge pull request #1029 from marty-rabens/prevent-XXE-processing

  Show description for 059fbf1
  josemduarte

  authored
  059fbf1

  Copy full SHA for 059fbf1

Commits on Jul 6, 2022

• Fixed issue #886 by escaping percent symbols when feature attributes are

  Show description for 152ea74
  

  jamesmorris

  authored and

  jamesmorris

  committed
  152ea74

  Copy full SHA for 152ea74

Commits on Jun 20, 2022

• Prevent XXE processing in XMLHelper

  marty-rabens

  authored
  1c94548

  Copy full SHA for 1c94548

Commits on Jan 5, 2022

• Merge pull request #998 from richarda23/#944-testcoverage

  Show description for a16d533
  josemduarte

  authored
  a16d533

  Copy full SHA for a16d533

Commits on Jan 3, 2022

• address PR comment

  

  otter606

  authored and

  heuermh

  committed
  0df9cca

  Copy full SHA for 0df9cca

• fixes #1008

  

  otter606

  authored and

  heuermh

  committed
  9e44b24

  Copy full SHA for 9e44b24

• test MSA

  otter606

  committed
  3c045a7

  Copy full SHA for 3c045a7

• simplify generics in RNASequence

  otter606

  committed
  c1a114f

  Copy full SHA for c1a114f

Commits on Jan 2, 2022

• Strand unit test, taxonomyID unit test

  otter606

  committed
  91f4e4c

  Copy full SHA for 91f4e4c

• Strand unit test

  otter606

  committed
  76c3bd4

  Copy full SHA for 76c3bd4

Commits on Nov 26, 2021

• fix mutable collections in GeneSequence

  otter606

  committed
  5088456

  Copy full SHA for 5088456

Commits on Nov 25, 2021

• add accessionID as a constructor argument

  otter606

  committed
  0e2e841

  Copy full SHA for 0e2e841

• initialise sequrnce storage, throwing IAE

  otter606

  committed
  cff87dd

  Copy full SHA for cff87dd

Commits on Nov 21, 2021

• tests for transcript sequence

  otter606

  committed
  451b559

  Copy full SHA for 451b559

Pagination

Previous

Next