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onbiojava-6.1.0

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Commits on Oct 27, 2022

• [maven-release-plugin] prepare release biojava-6.1.0

  josemduarte

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Commits on Oct 19, 2022

• Changed comments to javadoc

  

  jamesmorris

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• changed to use primitive boolean rather than the wrapper class

  

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Commits on Oct 18, 2022

• formatting changes

  

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• formatting changes

  

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• formatting changes

  

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• formatting changes

  

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• more formatting changes

  

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• More formatting changes

  

  jamesmorris

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  f3212e3

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• reversing formatting changes made during development

  

  jamesmorris

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  2dac5d9

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• removed unused import

  

  jamesmorris

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  7f116c9

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• fixed formatting change

  

  jamesmorris

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• added back empty line that was removed

  

  jamesmorris

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  63b5d85

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• more fixes to formatting

  

  jamesmorris

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• undone formatting changes

  

  jamesmorris

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• Changes to improve the testGithub942 test

  

  jamesmorris

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• When writing out feature qualifiers if they are db_xref values handle

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  jamesmorris

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• Set if a db_xref qualifier requires quotes

  

  jamesmorris

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• Changed the 'name' set by the super() call to the Qualifier constructor

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  jamesmorris

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Commits on Oct 12, 2022

• updated test data and tests

  

  jamesmorris

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  72347b0

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• updated the test data and tests

  

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• Updated test file

  

  jamesmorris

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  78a6e21

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• maintain quotes around feature qualifiers if they are present

  

  jamesmorris

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• Handle partial locations in typical cases

  

  jamesmorris

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  21ec595

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• Changed the file used for testing to one whith a much smaller sequence

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  jamesmorris

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• added file to test for handling features containing joins

  

  jamesmorris

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Commits on Oct 3, 2022

• updated the source of the accession to GENBANK

  

  jamesmorris

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• Removed getLocusName()

  

  jamesmorris

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• Changes to fix a number of issues we have seen including empty locus

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Commits on Jul 11, 2022

• Merge pull request #1029 from marty-rabens/prevent-XXE-processing

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  josemduarte

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Commits on Jul 6, 2022

• Added test for issue #886

  

  jamesmorris

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  jamesmorris

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  008595b

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• Fixed issue #886 by escaping percent symbols when feature attributes are

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  jamesmorris

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  jamesmorris

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Commits on Jun 20, 2022

• Prevent XXE processing in XMLHelper

  marty-rabens

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Commits on Feb 1, 2022

• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
  91412e2

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• [maven-release-plugin] prepare release biojava-6.0.5

  josemduarte

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