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Commits on Apr 18, 2020

• Merge pull request #868 from josemduarte/mmcif-branched-polymers

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Commits on Apr 13, 2020

• Now considering branched entities as non-polymeric. Ends up in a more consistent state. Can be mmtf-encoded.

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• Now biojava can parse mmcif files with carbohydrates, though it ignores the carbohydrate chains

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Commits on Jan 25, 2020

• Merge branch 'master' into interface-finder

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• Cleanup

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• Merge pull request #859 from josemduarte/optimise-sym-mates-clusterer

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• Initial implementation and tests

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Commits on Jan 21, 2020

• Now testing for subunit clustering with entity ids

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• Right order of params

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• New test

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Commits on Jan 20, 2020

• Extracting method in test

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Commits on Jan 12, 2020

• Merge pull request #857 from josemduarte/optimise-sym-mates-clusterer

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Commits on Dec 27, 2019

• Extracting duplicate code to a method. Some cleanups

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Commits on Nov 13, 2019

• Covering another alt loc bond edge case

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Commits on Nov 12, 2019

• Now all tests pass

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Commits on Nov 10, 2019

• Extending test

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• Fixing issue: no bonds between different altloc atoms

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Commits on Sep 3, 2019

• Fixing test and clean up

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Commits on Sep 2, 2019

• New test for #792

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• Fixing #671

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• Fixing potential bug

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• Cosmetics

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• Merge branch 'master' into mmtf

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Commits on May 11, 2019

• cleanup and updates to ciftools 0.4.1

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  Sebastian Bittrich

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Commits on May 7, 2019

• should remove formatting issues for files which did not change

  

  Sebastian Bittrich

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• removes star imports

  

  Sebastian Bittrich

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Commits on May 2, 2019

• removes unnecessary changes

  

  Sebastian Bittrich

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Commits on May 1, 2019

• stub for to test date format parsing

  

  Sebastian Bittrich

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• updates to ciftools from maven

  

  Sebastian Bittrich

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Commits on Apr 29, 2019

• moves some tests to integration

  

  Sebastian Bittrich

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• full model, type-safe builder integration, fetch URL

  

  Sebastian Bittrich

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Commits on Apr 25, 2019

• updates CifFileSupplier to infer types

  

  Sebastian Bittrich

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• writing of Cif files for AltLocs

  

  Sebastian Bittrich

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• reading and writing of Cif/Bcif files, integration

  

  Sebastian Bittrich

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Commits on Apr 24, 2019

• stub for CifFileSupplier

  

  Sebastian Bittrich

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