These two static API methods needs to stay public.

andreasprlic · andreasprlic · commit 74d26486e827 · 2015-06-26T14:54:37.000-07:00
diff --git a/biojava-structure-gui/src/main/java/org/biojava/nbio/structure/align/gui/jmol/StructureAlignmentJmol.java b/biojava-structure-gui/src/main/java/org/biojava/nbio/structure/align/gui/jmol/StructureAlignmentJmol.java
@@ -349,7 +349,7 @@ public void actionPerformed(ActionEvent e) {
       }
    }
 
-   private static String getJmolString(AFPChain afpChain, Atom[] ca1, Atom[] ca2){
+   public static String getJmolString(AFPChain afpChain, Atom[] ca1, Atom[] ca2){
      
       if ( afpChain.getBlockNum() > 1){
          return getMultiBlockJmolScript( afpChain,  ca1,  ca2);
@@ -424,7 +424,7 @@ private static String getJmolString(AFPChain afpChain, Atom[] ca1, Atom[] ca2){
       return j.toString();
    }
    
-   private static String getJmolScript4Block(AFPChain afpChain, Atom[] ca1, Atom[] ca2, int blockNr){
+   public static String getJmolScript4Block(AFPChain afpChain, Atom[] ca1, Atom[] ca2, int blockNr){
 	   int blockNum = afpChain.getBlockNum();
 	   
 	   if ( blockNr >= blockNum)

Original file line number	Diff line number	Diff line change
`@@ -349,7 +349,7 @@ public void actionPerformed(ActionEvent e) {`
`349`	`349`	`}`
`350`	`350`	`}`
`351`	`351`
`352`		`- private static String getJmolString(AFPChain afpChain, Atom[] ca1, Atom[] ca2){`
	`352`	`+ public static String getJmolString(AFPChain afpChain, Atom[] ca1, Atom[] ca2){`
`353`	`353`
`354`	`354`	`if ( afpChain.getBlockNum() > 1){`
`355`	`355`	`return getMultiBlockJmolScript( afpChain, ca1, ca2);`
`@@ -424,7 +424,7 @@ private static String getJmolString(AFPChain afpChain, Atom[] ca1, Atom[] ca2){`
`424`	`424`	`return j.toString();`
`425`	`425`	`}`
`426`	`426`
`427`		`- private static String getJmolScript4Block(AFPChain afpChain, Atom[] ca1, Atom[] ca2, int blockNr){`
	`427`	`+ public static String getJmolScript4Block(AFPChain afpChain, Atom[] ca1, Atom[] ca2, int blockNr){`
`428`	`428`	`int blockNum = afpChain.getBlockNum();`
`429`	`429`
`430`	`430`	`if ( blockNr >= blockNum)`