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Commits on Nov 23, 2016

• Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.

  josemduarte

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Commits on Nov 22, 2016

• Implementing new crystallographic metadata fields.

  josemduarte

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• Implementing parsing of atom_sites category in mmcif parser/consumer

  josemduarte

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Commits on Jul 13, 2016

• Fixing #533

  josemduarte

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Commits on Jun 22, 2016

• Introduce @CIFLabel(label="str") annotation

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  sbliven

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  josemduarte

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• Fix #480. Correct spelling of _symmetry.space_group_name_H-M in CIF output

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  sbliven

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  josemduarte

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Commits on Jun 13, 2016

• Adapt CeSymm code to new SymmetryAxes API

  lafita

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Commits on Jun 7, 2016

• Fix symmetry axes position bug

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  sbliven

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• Add information for construction of full list of symmetry axes.

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Commits on Jun 6, 2016

• Refactor SymmetryAxis class to encapsulate individual axes

  sbliven

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Commits on Jun 3, 2016

• Simplify SymmetryAxis implementation & fix getSymmetryAxes()

  sbliven

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• Adding TestSymmetryAxes prior to refactoring

  sbliven

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Commits on Apr 29, 2016

• Added handling of '?' and other non integer string for the charge.

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  abradle

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  josemduarte

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• Refactored ChargeAdder and fixed bugs where it wasn't adding charges to all groups.

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  abradle

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  josemduarte

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Commits on Apr 11, 2016

• Fixing bug in mmcif writing: ins codes were written as ascii code

  josemduarte

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Commits on Apr 6, 2016

• Fix #449 by copying SEQRES to new chains

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  sbliven

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Commits on Mar 14, 2016

• Fixed a bug where nucleotide bonds were not being generated. Added a test to ensure nucleotide bonds are being generated.

  

  Anthony Bradley

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  josemduarte

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Commits on Mar 10, 2016

• Light cleanup:

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  sbliven

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• Running spacestotabs on recent changes

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• Run addlicense

  sbliven

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Commits on Mar 9, 2016

• Merge branch 'master' into removeLoadChemCompInfo

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  josemduarte

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• More whitespace fixes

  sbliven

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• Converting initial spaces to tabs.

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• Removing template messages

  sbliven

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• Remove trailing whitespace globally from .java files

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• Running addlicense.sh

  sbliven

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• Merge branch 'master' into removeLoadChemCompInfo

  josemduarte

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Commits on Mar 8, 2016

• Fixing a few bugs that arose after loadChemCompInfo removal, #426

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  josemduarte

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• Fix PDBFileParser bug with missing trailing spaces.

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  sbliven

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• Fixed DBRef#toPDB() method to give 80 characters line

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  sroughley

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  sbliven

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• Merge branch 'master' into removeLoadChemCompInfo

  josemduarte

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• Merge remote-tracking branch 'biojava/master'

  sbliven

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• Honor prefixes for StructureNames

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  sbliven

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• Tests pass now, except for TestLongPdbVsMmcif

  josemduarte

  committed
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• Removing loadChemCompInfo, some tests don't pass yet

  josemduarte

  committed
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