Updated the test - alt loc groups need not be the same size as main groups IF they are heterogenous (different PDB name).

abradle · abradle · commit 0ba865638f42 · 2016-03-29T11:33:16.000-07:00
diff --git a/biojava-structure/src/test/java/org/biojava/nbio/structure/TestAltLocs.java b/biojava-structure/src/test/java/org/biojava/nbio/structure/TestAltLocs.java
@@ -179,8 +179,10 @@ private void ensureAllAtomsSameAltCode(Group groupInputAltLocGroup, Group inputM
 			return;
 		}
 		
-		// Check that the atom group is the same size as the alt loc group
-		assertEquals(groupInputAltLocGroup.getAtoms().size(), inputMainGroup.getAtoms().size());
+		// Check that the atom group is the same size as the alt loc group (as long as it's not a case of microheterogenity
+		if (groupInputAltLocGroup.getPDBName().equals(inputMainGroup.getPDBName())){
+			assertEquals(groupInputAltLocGroup.getAtoms().size(), inputMainGroup.getAtoms().size());
+		}
 		Character defaultAltLoc = null;
 		for (Atom atom : groupInputAltLocGroup.getAtoms()) {
 			
